Gene Spro_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3821 
SymbolthyA 
ID5606799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4228016 
End bp4228810 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content54% 
IMG OID640939381 
Productthymidylate synthase 
Protein accessionYP_001480045 
Protein GI157372056 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0782248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.435378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATCTGGATTT GATGAACAAA GTGCTCGCCG AGGGCACCCC TAAAGCCGAC 
CGTACCGGCA CTGGCACCTT GTCGATATTC GGCCACCAGA TGCGTTTCAA TTTGCAGGAA
GGGTTTCCGC TGGTCACTAC CAAAAAGTGT CACCTGCGTT CAATCATCCA TGAGCTGCTG
TGGTTCCTGA ACGGTGACAC CAACGTGGCT TACCTGAAGG AAAACAAAGT CAGCATCTGG
GACGAGTGGG CCGATGAAAA CGGTAACCTT GGCCCGGTGT ACGGCAAGCA GTGGCGTGCC
TGGGGGACGG CGGACGGTCG TCAGATCGAT CAATTGACCA CCGTGCTGAA CCAGTTGAAA
CAGGACCCGG ATTCACGCCG TATCATTGTT TCAGCCTGGA ACGTGGGGGA GTTGGATCAG
ATGGCGTTGG CACCGTGCCA CGCGTTCTTC CAGTTCTACG TGGCGGATGG CAAATTGTCT
TGCCAACTGT ACCAGCGTTC CTGCGATGTG TTCCTCGGTT TGCCGTTCAA CATTGCCAGC
TACGCGCTAT TGGTACATAT GATGGCGCAG CAATGTGACC TGGAAGTGGG TGATTTCGTC
TGGACCGGCG GCGACACTCA TTTGTACAGC AACCATATGG AACAAACCCA GCTGCAGTTG
ACGCGTGAGC CGCGTGCCTT GCCGAAATTG GTGATCAAGC GCAAGCCGGC ATCGCTGTTT
GATTACCGTT TCGAAGACTT TGAAATCGAA GGTTACGATC CGCACCCAGC CATTAAGGCA
CCGGTTGCCA TCTGA
 
Protein sequence
MKQYLDLMNK VLAEGTPKAD RTGTGTLSIF GHQMRFNLQE GFPLVTTKKC HLRSIIHELL 
WFLNGDTNVA YLKENKVSIW DEWADENGNL GPVYGKQWRA WGTADGRQID QLTTVLNQLK
QDPDSRRIIV SAWNVGELDQ MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS
YALLVHMMAQ QCDLEVGDFV WTGGDTHLYS NHMEQTQLQL TREPRALPKL VIKRKPASLF
DYRFEDFEIE GYDPHPAIKA PVAI