| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3631 |
|---|
| Symbol | |
|---|
| ID | 5606050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4015438 |
|---|
| End bp | 4016460 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939182 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_001479855 |
|---|
| Protein GI | 157371866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0473418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.881878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATAA ATCTCAGCCA GCACCGGGCG CGTAAGCGAC ACTGGGCTTT CAGCCTGTGG
CCGCTGCTGC TGTTTGCCGT GTTGCTGATG CTGGGCGCGC AGTTGGCGTG GCACTATTGG
CCGCAATTAC TGATGCAAAG CGTGGTGTGG CAGAAAGGGC TGCACCTGCA ATTGGCGGGT
CTGTTGCAGC AGGTAAAAGC GGCACCGCAA CAGGCCGGGT TGGCGCTGAT GTTGTTCAGC
CTGAGTTATG GTGTGCTGCA CGCCCTTGGC CCCGGCCACG GTAAAGTGGT GATTGCCACC
TATCTGGCTA CCCATCCGGC GCGGTTGAAA AGCAGCCTGA AACTGACCTT TGCCGCATCG
TTGGTGCAGG GACTGGTGGC GATCGCGCTG GTGACGTTGA TGCTGGTGGT ACTGCAACTG
TCGTCCCGGC AACTGCACCA GAGCAGTTTC TGGCTCGAGA AAGGCAGTTT TATTCTGGTG
ATGCTGCTCG GGGTGTTGCT GAGCTGGCGA GCGCTGAAGC GTTTGTATTA TGCGGTGAAA
GCCATGCGTC CGTCGCCAGC GCTGCGAATC AACAGCCTGC AACCGCTGCC GGCGGATCAC
GTTCACAGCG AGCATTGCGG CTGCGGTCAC CGCCATATGC CGAGCGACAG CGAACTGCAG
GCGGGTAGCG ACTGGCGTAC ACAGACCGCC ATCGTGTTGG CGATGGGAAT GCGGCCGTGC
TCGGGCGCAA TACTGGTGTT GCTGTTTTCC AAGGTGATTG GCGTGTTTGT CTGGGGCGTT
TTCTCGGCGT TGGCCATGGC GCTGGGCACC TCACTGACCA TCTCATTATT GGCCTTGTTG
GTGCATTACA GTCGCCGATT GGCGGTACGT TTCAGCCAAT CGCGTGCACC TGCGGCCTGG
AGTGCGGTGG CCTGGGGTTC GCTGGCGCTG GCCGGTGGCC TGATTTTGCT GTTCGCCGGG
CTGTTGCTGT ATCTCACTGC CCAGTCGGAG TTTATCGGCG GCATCCGGCC TTTCTCCCGC
TGA
|
|---|
| Protein sequence | MSINLSQHRA RKRHWAFSLW PLLLFAVLLM LGAQLAWHYW PQLLMQSVVW QKGLHLQLAG
LLQQVKAAPQ QAGLALMLFS LSYGVLHALG PGHGKVVIAT YLATHPARLK SSLKLTFAAS
LVQGLVAIAL VTLMLVVLQL SSRQLHQSSF WLEKGSFILV MLLGVLLSWR ALKRLYYAVK
AMRPSPALRI NSLQPLPADH VHSEHCGCGH RHMPSDSELQ AGSDWRTQTA IVLAMGMRPC
SGAILVLLFS KVIGVFVWGV FSALAMALGT SLTISLLALL VHYSRRLAVR FSQSRAPAAW
SAVAWGSLAL AGGLILLFAG LLLYLTAQSE FIGGIRPFSR
|
|---|
| |