| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3587 |
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| Symbol | |
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| ID | 5605700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 3961366 |
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| End bp | 3964401 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939138 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001479811 |
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| Protein GI | 157371822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.334084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0742158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA AAATATCGCA TCATTTAGCG GTAAGAAAAC CGCTTTCCAA AATTTACCTC
GCACTTTTCT CCGCGCCATT GCTATTGATG GGGTCTGCCG ATATGGCTCG GGCCGACGAT
GTCATATTCG ATGGTGAATC CAAAGTGACA GAACCCTTAG CCTACAGCGG GAATGTTTAC
GTCGGTCGCA ATCAAAGTGG AAACCTGTTG ATAGATAATG GCCAGGTCGG CGGCTATAAC
ATCAATATCG GTACCCGCTC AGACGGCAAA ATTTATGAAA GCCTGGTCAC GGTCAGAGGA
CCTAATGCGG TATTGAGTGC CGTAAACGAT CAAAATGTTC TGCGTGGCAG TTTAAACCTC
GGCCAGGGAA CATTGCGGGT TGAAGATGGC GGGCTGGCCA GTGCGAAAGA AATTATCGTC
GGCACCACCG GAGGTTACGA CAGCCATTTG AATGTTAAAG GTGCCGGTTC CAAAGTTACC
AGCGACAGGC TTGGCATCGG CTTTGGACAG GGCGCGCGTT CCACCCTGCT GATTGAAGAT
GGCGGGGTGG TGACAACCAC GGCCGCCGCC AGAATAGACA GCGGATTCAA GCCTGATGAG
GCCGACAAGC TGAACCCCAA AGCCACGGTG ACGGGTAAAA ACTCGCAGTG GAACATCAGC
CAAACGCTCA CGGCCAACGG CGATGTGGAC GTGCTCAATG GCGGCGTGGT TAACGTCGGC
AGCGCGGAAA TTGCCGGCGT TTCCGGCTCG CGCAAAACTG CCGAGCTTTA TATCGCTGGT
GAAGGCTCGC GCTTTACCAG TGCCGGCAGC GTCAATGTGG GAGATTATGG CAACGGTGTA
CTGTCGGTGG TGGACGGCGG AACATTCTCC GCCGGGGCTA ACGAGCTGCG GTTGGGCGAT
ACCGGCTCCG GTTCGAACAG GGGCGCGCTA ATCATCGGCA GCCGCGGCAA TATGGATACC
GGCACCGGCC TGACCGAACC CACGCTCGGT GCGGCGGGCG GCGCGGGTAC GGTCGATGCC
CAAACGGTGG TCAATCTGCG CGGTGGGTTA TTCGGCAGCT ATGTGTACTT TAACCATACC
TCCGACAACT ATGATTTCCG CAATAAGATG GTTGGCGAAG GTGAGGTGAT CAACACCGCC
GGGCAGACGA CGCTGAGCGG GGATCTTACC CAGCTTAAGG CGAACGTAAC CGCCCGTGGC
GGTAAAATCA TCATTAACAG CGATATCAAT ACGCAGCCAG AAGACAGTCC TTTCGACGTG
CAGACCCTGA GTGCCGAGAA TGGCGGTACG TTGATTCTTA ATGCGACAGC CGGCTCCGAC
GTCAGCAATG GTCTGGGTTA CAGCAGTGCT GCTTCGATCA AATCCGGCGG CACGCTGGGC
GGCAATGGCA CCTTAGGTCA GACAGAAATT CAGTCCGGTG GTCACATTTC CCCTGGCGAC
GGGAATATTG GCACTCTGAC GCTGAAACGC TATCTGAACT TCATTGGTGA ATCTTTCTAC
GACGTTGATA TCGCCGGTGA TGGCAGTAGT GACAAACTGC TGGTTACGGG TAAAACCACT
ATCAGCGATC AAGCGAAGGT GCAGGTGACT GCGCTGGACT CGCAAACCAG CTATCAGACC
GGCCAAAGCT ATCGTATTTT AACCTCGGAA GGGGGAATTG ACGGGCAGTT CGCCGAAGCG
GTCTCAAAAT CTGCGTTCCT GGACGTTGCG CTCAAACACG AGGCTAACGC CGTGGATTTG
ACGATTGCGC AGAAAGGCGG CGGTGAGAAC CCCGGAGGTG AAAATCCGGG TGGTGAGAAC
CCAGGCGGCG AGAACCCAGG CGGTGAAAAT CCGGGAGGCG AAAACCCTGG CGGCGAGAAT
CCGGGGGGTG AAAACCCAGG CGGTGAGGGT CCGGGAGAAG GCAGCGGCAA GCCAGGTATT
TTCCAGACGG TGGCACAAAC CGACAACCAA TGGGATACCG CGGGTGCGCT CTCGACTCTG
GCGCAAGGCG GCCCTTCATT GGCCCTGTAC AACTCACTGT TGTTATTGAG TGCGCCCGAA
GCTCGTGAGG CATTCAATCA ACTTTCTGGT GAGGTCTATC CCTCCATGCA ATCTAACCTG
ATTGCCGGCA GCACCATGCT GTTCAATGTG CTCAATCAGC GCATGTTGCG CGCTTTTGAT
AACGATACGT TGCCCGTTCC GCCATTGGCG ATGACGCTGG TTCAACCGGC GCAGGCCGAA
AACAGTGGCG TGTGGGGGCA GACGTTTGGC TCATGGGCAA GAAACAGCGG TAACGACAAC
GTTGGAAAAC TCGATGGCAA CACCAGCGGC TTCCTGCTGG GGGCAGACCA TAAATTAGCG
GATAGCAGTG TTCGCGTTGG TGGATATTTT GGTTATAGCC GCGGTGATTA TGATGTCGAT
AGCCGCAGCT CCAAGTCCGA CAGCGATAAT TATCACCTCG GTCTGTATGC CGCAGGGCAG
CAAGGCGCCT TCTCGTTACG TGGCGCGTTG GGTTATACCT GGCACCGGCT GGAAAATGAG
CGCAACGTTA ACTTCGGTAA TTACTCGGAT CGGCTTAAGG CAGACTATGA TGCCGACTCG
CTGCTGGCGT TCACCGAAGC GGGCTACCGT TTTGGGCAGT CGGACGCGAA CCTTGAGCCC
TTCGTCAATC TGAGCTACAT CCGTCTGCAT ACGGATAACT TCGAGGAAAG TGGCGGTGCC
GCAGCGCTTA GCGTGCGTAA TGAAACGATG AATACCTTCT ATTCCACGTT GGGCGTGCGC
GGTACGGTTG AACTGCCGCA GAACGTCAGT CTTTACGGCT CACTGGGTTG GCAGCATGCC
TACGGCGATA AAACCACCTC TTCGCGTATG GCCTTTGCCG GCAGCGATGC GTTTACCACG
CAGGGCACTG CGGTTGATGA CAACCTGATG GTGGCGGACG TCGGGGTGAG CGTGAAGCTG
TCGCGATCCA CTAGCCTGGA TCTCGGCTAT CAGGGGCAAT ACGGTTCTGA TACCCAGGTT
AATGCCGTTA ATGCCAACAT CCGATGGTCA TTCTGA
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| Protein sequence | MKDKISHHLA VRKPLSKIYL ALFSAPLLLM GSADMARADD VIFDGESKVT EPLAYSGNVY
VGRNQSGNLL IDNGQVGGYN INIGTRSDGK IYESLVTVRG PNAVLSAVND QNVLRGSLNL
GQGTLRVEDG GLASAKEIIV GTTGGYDSHL NVKGAGSKVT SDRLGIGFGQ GARSTLLIED
GGVVTTTAAA RIDSGFKPDE ADKLNPKATV TGKNSQWNIS QTLTANGDVD VLNGGVVNVG
SAEIAGVSGS RKTAELYIAG EGSRFTSAGS VNVGDYGNGV LSVVDGGTFS AGANELRLGD
TGSGSNRGAL IIGSRGNMDT GTGLTEPTLG AAGGAGTVDA QTVVNLRGGL FGSYVYFNHT
SDNYDFRNKM VGEGEVINTA GQTTLSGDLT QLKANVTARG GKIIINSDIN TQPEDSPFDV
QTLSAENGGT LILNATAGSD VSNGLGYSSA ASIKSGGTLG GNGTLGQTEI QSGGHISPGD
GNIGTLTLKR YLNFIGESFY DVDIAGDGSS DKLLVTGKTT ISDQAKVQVT ALDSQTSYQT
GQSYRILTSE GGIDGQFAEA VSKSAFLDVA LKHEANAVDL TIAQKGGGEN PGGENPGGEN
PGGENPGGEN PGGENPGGEN PGGENPGGEG PGEGSGKPGI FQTVAQTDNQ WDTAGALSTL
AQGGPSLALY NSLLLLSAPE AREAFNQLSG EVYPSMQSNL IAGSTMLFNV LNQRMLRAFD
NDTLPVPPLA MTLVQPAQAE NSGVWGQTFG SWARNSGNDN VGKLDGNTSG FLLGADHKLA
DSSVRVGGYF GYSRGDYDVD SRSSKSDSDN YHLGLYAAGQ QGAFSLRGAL GYTWHRLENE
RNVNFGNYSD RLKADYDADS LLAFTEAGYR FGQSDANLEP FVNLSYIRLH TDNFEESGGA
AALSVRNETM NTFYSTLGVR GTVELPQNVS LYGSLGWQHA YGDKTTSSRM AFAGSDAFTT
QGTAVDDNLM VADVGVSVKL SRSTSLDLGY QGQYGSDTQV NAVNANIRWS F
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