| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3554 |
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| Symbol | |
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| ID | 5605456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3928659 |
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| End bp | 3931739 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640939105 |
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| Product | multidrug efflux system subunit MdtC |
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| Protein accession | YP_001479778 |
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| Protein GI | 157371789 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTCT TCGCCCTGTT TATCTACCGG CCGGTCGCCA CCACGCTGCT GACATTGGCT
ATCGCCATCA GCGGCGTGAT CAGCTTCAGC CTGCTGCCAG TCTCGCCGCT GCCACAGGTC
GACTACCCGG TGATTTCGAT CAGCGCTTCG CTGCCGGGTG CCGATCCAGA GACCATGGCC
TCGTCGGTGG CGACGCCGCT GGAACGGGCG CTGGGCCGCA TTGCCGGGGT CAATGAGATG
ACCTCGATGA GTTCCCTGGG CAGCACCCGG GTGATTCTGC AGTTCGATCT CGATCGTGAT
ATCAACGGGG CCGCGCGTGA CGTGCAGGCA GCGATTAACG CCGCACAAAG CCTGTTGCCC
ACCGGCATGC CAAGCCGCCC CAGCTACCGT AAGGTCAACC CGTCCGACGC GCCGATCATG
ATCCTCACGC TAACCTCGGA TACCTACAGC CAGGGCCAAC TTTACGATTT TGCCTCTACC
CAATTGGCGC AAAAAATCGC CCAGACCGAA GGGGTGGGTG ACGTTTCGGT CGGTGGTAGC
TCACTGCCTG CGGTGCGGGT CGAACTCAAC CCAAGCGCCC TGTTCAATCA GGGCATATCG
CTCGATGCGG TGCGCCAGAC CATCAGCAAT GCCAACGTGC GCAGGCCACA AGGGTCGGTG
GAAAATCAAC AGCAGCGCTG GCAGATCCAG GCCAATGACG AGCTGAAAAC CGCCGAGGTC
TACCGGCCCC TGATTATCCA CTACAACAAC GGTTCGGCGG TACGCCTGAG CGACGTGGCC
GAGGTTAACG ATTCGGTGCA GGATGTCCGC AACGCCGGGA TGACCAACGC CAAACCGGCG
ATTATTTTGA CTATCAGCCG GGCGCCGGAC GCCAATATCA TTGAAACCGT CGATCGCATT
CGCGCCGAAT TGCCCACGCT GCAAAACAAT ATTCCGGCAT CGATCCAGCT CAATATCGCC
CAAGACCGCT CGCCGACCAT TCGCGCCTCG TTGGCAGAAG TAGAGCAGTC GTTGGTGATC
GCCATTGGGT TGGTGATCCT GGTGGTGTTC ATCTTCCTGC GTTCCGGCCG CGCTACGCTG
ATCCCGGCGG TCGCCGTGCC GGTCTCGCTG ATCGGCTCCT TCACCGCCAT GTATCTGTGT
GGCTTCAGCC TGAATAACCT GTCGCTGATG GCACTGACCA TCGCTACCGG CTTCGTGGTC
GACGACGCTA TCGTGGTGCT GGAGAATATT TCTCGCCATA TCGAGGCCGG CATGAAACCC
ATTAATGCGG CGCTGGTCGG GGTGCGTGAA GTGGGCTTCA CCGTGCTGTC GATGAGCGTG
TCGCTGGTGG CGGTGTTTAT TCCGCTGCTG CTGATGGAAG GCCTGCCTGG CCGCCTGTTC
CGCGAGTTCG CCGTCACCCT GTCGGTGTCG ATCGGGCTGT CGCTGATTAT CTCGCTGACG
CTGACACCGA TGATGTGCGC CTACCTGCTG CGCCACCAGC CGCCGCGCTC GCAGCGGCGC
ATTCGCGGCT TCGGTAAAAT GCTGTTGGCG TTGCAAAAGG GTTATGGCCG TTCGCTGAGT
TGGGTGCTTG GCCACTCGCG CTGGGTGCTG GCGGTGTTTC TGGCCACCAT CGCGCTCAAC
GTGTGGCTGT ACGTCAGTAT TCCAAAAACC TTTTTCCCGG AACAGGATAC CGGCCGGCTG
ATGGGCTTTA TCCAGGCCGA TCAGAGCATT TCCTTCCAGG CTATGCGCGT TAAGCTGGAA
GATTTCATGA AAATAGTGCG TGAAGATCCG GATGTGGATA ACGTCACCGG TTTCACCGGC
GGTTCACGCA CCAACAGCGG CTCGATGTTT ATCTCGTTGA AACCCCTGTC GGTGCGCAGC
GATGATGCAC AGAAAGTGAT CGCCCGCCTG CGCGCCAAAT TGGCCAAAGA GCCGGGTGCC
AGCCTGTTCC TGATGGCGGT GCAGGATATT CGCGTCGGCG GCCGACAGGC TAACGCCAGC
TATCAGTACA CTTTGATGGC GGATGACCTC GCTGCGCTGC GCGAATGGGA ACCGAAGATC
CGCACCGCGC TGGCCGCACT GCCGGAGCTG GCGGACGTCA ACTCCGATCA GCAGGACAAA
GGCTCGGAAA TGGACCTGGT TTACGATCGC GAAACCATGG CCCGTTTGGG GATTTCGGTC
TCCGATGCCA ATAACCTGCT GAATAACGCC TTCGGCCAGC GCCAGATTTC GACCATCTAT
CAGCCGCTCA ATCAGTACAA GGTGGTGATG GAAGTCGCAC CGCCCTATAC CCAGGACGTC
AGTTCGCTGG ACAAAATGTT CGTGATCAAC AGCGACGGCA AGGCGATCCC ACTGTCCTAC
TTCGCCAGTT GGCGACCGGC CAATGCACCG CTGTCGGTCA ACCATCAGGG GCTGTCGGCC
GCCTCGACCA TCTCGTTTAA CCTACCGGAT GGCGGCAGCC TGTCTGACGC CACCGCCGGT
ATAGAACGCA CCATGACCGC ACTCGGCGTA CCCGCAACCG TGCGAGGGGC CTTTGCCGGT
ACCGCGCAGG TATTCCAGGA AACGTTGAAA TCCCAGTTGC TGCTGATCGC CGCCGCCATC
GCCACGGTGT ATATCGTGCT AGGCATCCTC TATGAAAGCT ATATTCACCC GCTGACCATC
CTGTCCACCC TGCCTTCTGC CGGCGTGGGC GCACTGCTGG CGCTGGAGTT GTTCGGCGCG
CCGTTCAGCC TGATTGCGCT GATTGGCATT ATGCTGCTGA TCGGCATTGT GAAGAAAAAT
GCCATCATGA TGGTCGACTT TGCCCTGGAT GCACAACGCA ACGGCGGTAT CAGCGCACAT
GACGCCATTT TCCAGGCTTG CCTGCTGCGT TTCAGGCCGA TCATGATGAC CACACTGGCG
GCGCTTTTTG GCGCACTGCC ATTGGTGTTG ACCCACGGCG ACGGCGCAGA GTTACGTCAA
CCGCTCGGCA TCACCATCGT GGGTGGCCTG ATCGTCAGCC AATTGCTGAC GCTCTACACC
ACCCCGGTGG TTTACCTGTA TTTTGACCGG CTGCAGATGA AATTCCGTCG CGGCAAGAAA
CTGGATCCTT TGCCCCAATA A
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| Protein sequence | MKFFALFIYR PVATTLLTLA IAISGVISFS LLPVSPLPQV DYPVISISAS LPGADPETMA
SSVATPLERA LGRIAGVNEM TSMSSLGSTR VILQFDLDRD INGAARDVQA AINAAQSLLP
TGMPSRPSYR KVNPSDAPIM ILTLTSDTYS QGQLYDFAST QLAQKIAQTE GVGDVSVGGS
SLPAVRVELN PSALFNQGIS LDAVRQTISN ANVRRPQGSV ENQQQRWQIQ ANDELKTAEV
YRPLIIHYNN GSAVRLSDVA EVNDSVQDVR NAGMTNAKPA IILTISRAPD ANIIETVDRI
RAELPTLQNN IPASIQLNIA QDRSPTIRAS LAEVEQSLVI AIGLVILVVF IFLRSGRATL
IPAVAVPVSL IGSFTAMYLC GFSLNNLSLM ALTIATGFVV DDAIVVLENI SRHIEAGMKP
INAALVGVRE VGFTVLSMSV SLVAVFIPLL LMEGLPGRLF REFAVTLSVS IGLSLIISLT
LTPMMCAYLL RHQPPRSQRR IRGFGKMLLA LQKGYGRSLS WVLGHSRWVL AVFLATIALN
VWLYVSIPKT FFPEQDTGRL MGFIQADQSI SFQAMRVKLE DFMKIVREDP DVDNVTGFTG
GSRTNSGSMF ISLKPLSVRS DDAQKVIARL RAKLAKEPGA SLFLMAVQDI RVGGRQANAS
YQYTLMADDL AALREWEPKI RTALAALPEL ADVNSDQQDK GSEMDLVYDR ETMARLGISV
SDANNLLNNA FGQRQISTIY QPLNQYKVVM EVAPPYTQDV SSLDKMFVIN SDGKAIPLSY
FASWRPANAP LSVNHQGLSA ASTISFNLPD GGSLSDATAG IERTMTALGV PATVRGAFAG
TAQVFQETLK SQLLLIAAAI ATVYIVLGIL YESYIHPLTI LSTLPSAGVG ALLALELFGA
PFSLIALIGI MLLIGIVKKN AIMMVDFALD AQRNGGISAH DAIFQACLLR FRPIMMTTLA
ALFGALPLVL THGDGAELRQ PLGITIVGGL IVSQLLTLYT TPVVYLYFDR LQMKFRRGKK
LDPLPQ
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