| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3553 |
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| Symbol | |
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| ID | 5605455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3925543 |
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| End bp | 3928662 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640939104 |
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| Product | multidrug efflux system subunit MdtB |
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| Protein accession | YP_001479777 |
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| Protein GI | 157371788 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTGA TGCCACCTAA CCCCGGCGGT GGCCCATCCC GCCTGTTTAT TCTGCGCCCG
GTCGCGACCA CGCTGTTGAT GGTGGCGATC CTGCTGGCGG GGATTATTGG TTATCGCGCC
CTGCCGGTTT CCGCCCTGCC GGAAGTTGAC TATCCGACCA TTCAGGTGGT CACGCTGTAC
CCTGGCGCCA GCCCGGACGT GGTCACTTCG GCCATTACCG CCCCGCTGGA GCGCCAGTTT
GGCCAGATGT CCGGCCTGAA ACAGATGGCA TCGCAAAGCT CCGGCGGCGC CTCGGTCGTG
ACGCTGCAAT TCCAGCTTGA GCTGCCGCTC GACGTCGCCG AACAGGAAGT ACAGGCCGCG
ATCAACTCCG CCACCAACCT GTTACCCAGC GATCTGCCCT ACCCGCCGAT TTACAGCAAG
GTTAACCCTG CCGATCCACC GATACTGACG CTGGCCGTGA CTTCATCCGC CATGCCGATG
ACTCAGGTGG AAGACATGGT GGAAACCCGC GTAGCGCAGA AAATATCGCA GGTCACCGGC
GTCGGGCTGG TCACTATCTC CGGCGGTCAG CGGCCGGCGG TGCGCGTAAA ACTTAATGCC
GCGGCCGTTG CCGCCTACGG CCTGGACAGC GAAACTATCC GCACCGCCAT CAGCAATGCC
AACGTCAACT CCGCCAAAGG CAGCCTGGAT GGCCCGACGC GCTCGGTCAC GCTATCCGCC
AACGATCAGA TGAAGTCCGC CGACGATTAC CGCCAACTGA TTGTCGCCTA CCAAAACGGC
GCGGCGATCC GCCTGCAGGA TATCGCCACC ATCGAACAAG GCGCAGAAAA TACCCGGCTG
GCAGCCTGGG CCAATAAACA ACCGGCGATT GTGCTGAACA TCCAGCGTCA GCCGGGGGTG
AACGTGATCA CCACCGCCGA CAGCATCCGC GAGATGCTGC CCCAGTTGAT CAAGAGCCTG
CCAAAATCGG TCGACGTCAA GGTACTGACC GATCGCACCA CCACCATCCG CGCCTCGGTC
AGCGACGTGC AGTTCGAACT GCTGTTGGCG GTGGCACTGG TGGTGATGGT GATTTACGTA
TTCCTGCGCA ACGTACCGGC CACCATTATT CCGAGCGTCG CGGTACCGCT GTCGTTGATC
GGTACCTTTG CCGCCATGTA CTTCCTCGGC TTTTCAATTA ACAACCTGAC GCTGATGGCA
TTGACCATCG CCACCGGGTT TGTGGTCGAT GACGCCATCG TGGTGATTGA GAACATTTCG
CGCTATATCG AAAAGGGGGA AAAACCGCTC GATGCGGCGT TGAAAGGGGC CGGTGAAATC
GGCTTCACCA TTATCTCACT GACCTTCTCG TTGGTGGCGG TGCTGATCCC GCTGCTGTTT
ATGGGCGATA TCGTCGGCCG ACTGTTCCGC GAATTTGCGG TAACGCTGGC GGTGGCGATT
TTGATTTCCG CCGTGGTTTC ACTGACGCTG ACGCCGATGA TGTGCGCGCG CATGCTGAGC
CACGAATCGC TGCGTAAGCA GAACCGTTTT TCCGCGGCTT CAGAGCGTTT CTTTGATCGG
GTCATCGCCC GCTACGGCAA ATGGCTGAAA ACGGTGCTCA ACCACCCGTG GCTGACGCTC
GGCGTGGCGT TCAGCACGCT GCTGCTCACC GTCTTGCTGT ACCTGCTGAT CCCGAAAGGT
TTCTTCCCGG TGCAGGACAA CGGCATCATT CAGGGCACGC TGGAAGCACC GCAGTCGGTG
TCGTTCAGCA ATATGGCCGA GCGCCAACAG CAGGTGGCAG CAGAAATTCT CAAGGATCCG
GCGGTGGAAA GCCTGACGTC GTTTGTCGGC GTCGACGGCA CCAACGCCAC GCTCAACAGC
GGCCGTTTGC AGATCAACCT CAAGCCCTTA AGCGAACGCA GCGAGCGTAT TCCGGCCATC
ATCACCCGAC TGCAACAGAT GAGTACCCAG TTCCCCGGTG TGAAGCTGTA TCTGCAGCCG
GTACAGGATC TGACCATCGA TACTCAAGTC AGCCGCACCC AATACCAGTT CACCCTGCAG
GCGATGTCGC TGGACGATCT CAGTCTGTGG GTACCGAAAC TGATGGCGGA ACTGCAACAA
ACGCCGCAGT TGGCGGACGT GACCAGTAAC TGGCAGGATC AGGGCCTGGT GGCCTATGTC
AATGTCGATC GCGATTCGGC CTCTCGCCTC GGCATCAGCA TGAGCGACGT GGATAATGCG
CTGTACAACG CCTTCGGTCA GCGGTTGATC TCCACCATTT ACACCCAGGC CAACCAGTAC
CGCGTGGTGC TGGAACATGA CGTCAGCACT ACGCCAGGGC TGGCGGCGCT GAACGATATC
CGTCTGACCA GCAGCAACGG CACCATAGTG CCACTGAGCA CCATCGCCAA AATTGAACAG
CGCTTCGGGC CGCTGTCGGT TAACCATCTG GATCAATTCC CGGCGGCCAC CATCTCCTTT
AACGTCGCAG GAAATTATTC CCTCGGTGAA GCGGTTGACG CCATCACTCT GGCAGAAAAA
AACCTCAACC TGCCGAAAGA CATCACCACC CAATTCCAGG GCGCGACGCT GGCGTTCCAG
GCAGCGCTGG GCGGCACCTT ATGGCTGATC CTCGCGGCAG TAGTCGCGAT GTATATCGTG
CTGGGCGTGC TGTATGAGAG CTTTATTCAC CCGGTGACCA TTTTGTCCAC CCTGCCCACC
GCCGGGGTCG GTGCCTTACT GGCGTTGATG ATGGCCGGCA GCGAACTGGA CGTGATTGCC
ATTATCGGCA TCATCCTGCT GATCGGCATC GTGAAGAAAA ACGCCATTAT GATGATCGAC
TTTGCCCTGG CCGCCGAGCG GGAACAGGGA ATGACGCCGT ATGACGCAAT TTATCAGGCC
TGCCTGCTGC GTTTTAGGCC AATCCTGATG ACCACGCTGG CCGCGTTACT GGGCGCACTG
CCGCTGATGC TCAGCACCGG CGTCGGCGCG GAGCTGCGCC ACCCACTCGG AGTCTGTATG
GTCGGCGGGC TGGTGATGAG CCAGATCCTG ACGTTGTTCA CCACGCCGGT GATCTACCTG
CTGTTTGACA AGCTGGCGCG CAATACCCGT CGTCAGCCGG ATGCGCAGGA GCTGCCGTGA
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| Protein sequence | MQVMPPNPGG GPSRLFILRP VATTLLMVAI LLAGIIGYRA LPVSALPEVD YPTIQVVTLY
PGASPDVVTS AITAPLERQF GQMSGLKQMA SQSSGGASVV TLQFQLELPL DVAEQEVQAA
INSATNLLPS DLPYPPIYSK VNPADPPILT LAVTSSAMPM TQVEDMVETR VAQKISQVTG
VGLVTISGGQ RPAVRVKLNA AAVAAYGLDS ETIRTAISNA NVNSAKGSLD GPTRSVTLSA
NDQMKSADDY RQLIVAYQNG AAIRLQDIAT IEQGAENTRL AAWANKQPAI VLNIQRQPGV
NVITTADSIR EMLPQLIKSL PKSVDVKVLT DRTTTIRASV SDVQFELLLA VALVVMVIYV
FLRNVPATII PSVAVPLSLI GTFAAMYFLG FSINNLTLMA LTIATGFVVD DAIVVIENIS
RYIEKGEKPL DAALKGAGEI GFTIISLTFS LVAVLIPLLF MGDIVGRLFR EFAVTLAVAI
LISAVVSLTL TPMMCARMLS HESLRKQNRF SAASERFFDR VIARYGKWLK TVLNHPWLTL
GVAFSTLLLT VLLYLLIPKG FFPVQDNGII QGTLEAPQSV SFSNMAERQQ QVAAEILKDP
AVESLTSFVG VDGTNATLNS GRLQINLKPL SERSERIPAI ITRLQQMSTQ FPGVKLYLQP
VQDLTIDTQV SRTQYQFTLQ AMSLDDLSLW VPKLMAELQQ TPQLADVTSN WQDQGLVAYV
NVDRDSASRL GISMSDVDNA LYNAFGQRLI STIYTQANQY RVVLEHDVST TPGLAALNDI
RLTSSNGTIV PLSTIAKIEQ RFGPLSVNHL DQFPAATISF NVAGNYSLGE AVDAITLAEK
NLNLPKDITT QFQGATLAFQ AALGGTLWLI LAAVVAMYIV LGVLYESFIH PVTILSTLPT
AGVGALLALM MAGSELDVIA IIGIILLIGI VKKNAIMMID FALAAEREQG MTPYDAIYQA
CLLRFRPILM TTLAALLGAL PLMLSTGVGA ELRHPLGVCM VGGLVMSQIL TLFTTPVIYL
LFDKLARNTR RQPDAQELP
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