Gene Spro_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3448 
Symbol 
ID5604715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3819157 
End bp3819414 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content51% 
IMG OID640939001 
ProductPTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr 
Protein accessionYP_001479674 
Protein GI157371685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000454174 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCCAGC AAGAAGTTAC TATTACCGCT CCGAATGGTC TGCACACTCG CCCTGCCGCT 
CAGTTCGTGA AAGAAGCCAA AGGCTTCACG TCTGACATCA CCGTGACTTC TAACGGTAAA
AGCGCCAGCG CCAAAAGCCT GTTCAAACTG CAAACTCTGG GGCTGACTCA AGGGACCGTA
GTGACCATCT CCGCTGAAGG TGAAGACGAG CAGAAAGCCG TTGAACACTT GGTAAAACTG
ATGGCAGAGC TTGAGTAA
 
Protein sequence
MFQQEVTITA PNGLHTRPAA QFVKEAKGFT SDITVTSNGK SASAKSLFKL QTLGLTQGTV 
VTISAEGEDE QKAVEHLVKL MAELE