Gene Spro_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3364 
Symbol 
ID5602754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3725271 
End bp3726530 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content63% 
IMG OID640938910 
Productouter membrane efflux protein 
Protein accessionYP_001479590 
Protein GI157371601 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0128671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA TCCTTTCTCA CCCTTTACGG GTTGGCTGGC TGCTGCTTGC CTGTTGGGCA 
CCGGCCAGCC TGGCAGCGGA ATTGACGCTG CAACAATCGT TGACGGCGGC GGAACGCTAT
TCGGCGGAAC TTTCGGCCAA TCGGCATCAG GTGACTGCTC TGGAGAACAT GGCGGATTCG
GCGATGCAAT TGCCCGATCC CAAACTGAAG TTCGGGATTG AAAACGTGCC GGTGCAGGGT
GGCAACGCCC GGCGACTCAC CCGCGAAGGC ATGACGATGG GGCGGGTCGG CATCATGCAG
GATTACGTCA GCAGCACCAA ACGCCAGCGC AAGGCGGATA CCCTGCGTGC CGAAGCCAGC
CAGACGGATG CCGGCAGCGC TACCATCCGT GCCCGTTTGC AGCAGCAAAC TGCGCAGGCG
TGGCTGGAAC TGGCGCTGAG CCGGCAAACC TTGCGTGACG CCACCGCACT GGTTACGGAG
AGTGAGCGTC AAATAGCCAC TCAGCATGCC GGTGTGGCCG GTGGCGGCAC TCCTGCCAGC
GGCGTGCTGG ACGCCAGATT GACGCTGCTG GCCATGCAGG ACCGCATCAG TGAGGCGCAG
CGCGACGTTG CGGTAGCGCA GGCACGCCTG ACGCAACTGA CCGGTCAGGC AACCACGGAC
ACTGCCGGGG CAATGCCACG CTTTGAACGT TTGCCGGCCG ACAGCGACGT CTTGCGCCAG
GCGATCAAAC AACATCCTGA GGTGCAGCAG GCCAGTCGCG AGGCTGACGT GGCCAGAGCG
CGTTCGGCGC AGTCAGAGGT GGCGGCCATA CCGGACGTGG GGGTTGAGGT GTATTACGGC
AAGCGCGCCG ACGATTATGA GGATCTGGCC GGGGTGATGT TTACCGTTGA TCTGCCGCTG
TTCCGTTCGC AGCGGCAGGA TAAAGACTAT GCCGCTGACG TGTCCCGCAA CATGGAGGCC
AACGATCGGC TGACGTTGCT GATCCGCGAT CATCAGGCGC AGCTCGACAC GCTGTTGGCA
CAGTACCAGG CGGCGCAGGC GCAATGGCAG CGACAGCAGC AACAGGCGAT CCCCCTGCAG
CAACAGCGAG TGACTTTGCT GTTGGCGCAA TATCGCAGTG GAAAAAGCGA CTTGTCTGCG
CTGCTGGAGG CACGGCGGGC GCTGCTCGAC AGCCGCCTCA GCGCCGGTAA AGCCGCCCGT
GGACTGGCGC AGTTTTGGGC CGCCATCCGC TATCTCACCC CTCAGGAGGC AATGCAATGA
 
Protein sequence
MTIILSHPLR VGWLLLACWA PASLAAELTL QQSLTAAERY SAELSANRHQ VTALENMADS 
AMQLPDPKLK FGIENVPVQG GNARRLTREG MTMGRVGIMQ DYVSSTKRQR KADTLRAEAS
QTDAGSATIR ARLQQQTAQA WLELALSRQT LRDATALVTE SERQIATQHA GVAGGGTPAS
GVLDARLTLL AMQDRISEAQ RDVAVAQARL TQLTGQATTD TAGAMPRFER LPADSDVLRQ
AIKQHPEVQQ ASREADVARA RSAQSEVAAI PDVGVEVYYG KRADDYEDLA GVMFTVDLPL
FRSQRQDKDY AADVSRNMEA NDRLTLLIRD HQAQLDTLLA QYQAAQAQWQ RQQQQAIPLQ
QQRVTLLLAQ YRSGKSDLSA LLEARRALLD SRLSAGKAAR GLAQFWAAIR YLTPQEAMQ