| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3294 |
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| Symbol | |
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| ID | 5607322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 3645290 |
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| End bp | 3647119 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640938840 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001479520 |
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| Protein GI | 157371531 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.606188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCTC ACGCAGAGAA GTTATACACC CCCGTAGCAC TGGCAACTGC GGATGGTGTC
AGGGTTATTG CCACGCCCGG CACGAAAGCG GCGGAGCAAA CAAACGCTGA TGTGATTATC
CAGGGTCTTG AAGCTCGGGG CATTCAGCAC ATATTCCTGG TACCCGGCAA GCTGGTGTAC
CCACTGATTA AATCCATTGA ACATTCAGCC ATTAGCGGCA TCGTCGGCGC TCATGAAACC
GCCTGCGGCT TTATGGCCGA CGGCTACGCC CGCGCCAGCC GCAAGTTTGG CGTTTGTCTG
GGCATCTCCG GCCCCGGCAC CATGAATTTC CTGCCGGCGA TGGCCGCGGC CCAGGCCGAT
AAAATCCCGG TGCTTTATCT GGCCGGCGGT ATCGCCACTT ATCATGAAGC GCAGGGCGCT
TTCCAGGACG GCAGCAATAG CGGCATTGAT GAGCTGACTA TCGTCAAACC GCTGCTGTCC
GCCGCAATAG AAGTGAAAAA TAATCTTACG TTGCAGCACG AGCTGCGGCG CAGTTTGTCC
TGCCTGAACA CCCAGCGTAA AGGCCGCGCT TATTTAAGCG TACCGGTCGA TATGCAAAAG
AAAACGGTAG CCGGCAATTA TGAAGCCAGC CCACAGCGTA CGCCACAGTG CCGTGAAGCG
GCGATCGACC AACAGGCGCT GGAGCAGGTG TTGGATGATT ATCTGCTGCG CGGGCTGAAC
GTTGCCTGCC TGGTGGGTAA CCGCATGAAT AATCCGTTGG ATGCCGCACT GCTGCTGCGC
CTGGCGGAGA AATACCGCTT GCCGGTTGCC ACTACGCTGT CCGGCAAGGG CGCTTTTCCC
GAAGGGCACG AGCTGGCGCT GGGGCTGTAT GGTTTCGCCG GTCATACCCG GGCGGTGGAA
ACCATCAATG GCGACGAGGT CGACGTGCTG CTGGTGCTGG GCTGCGATCT CAGCCAGCGC
GACAGCCTGA ACTGGAATTC ACGGCTGCAT GGCACCAAAA CGCTGGTGGT GATTGATGAA
GATTTCGACA AGGTCAGCTC GCATTATCAG CCGGACATGC AGATTTTCTC CAGCCTGACC
GATACGCTGC GGCACCTGCT GGATGCGGTC AGCGATGAAG ATCAGCATCT GGTCGCCATC
AAGAGCCTGC GCAATGGCTG GCTTGAACAG GTGCGCCAAC TGCCGTTGGA GCAACAGCAG
CCCGATTTAC AGGCGCGCCT GGCCCTGGGT GAAGCCAATA TGTACCCCGG CGACGCCATT
AAACGCATTC GCAGCCGGAT GGGCCCGGAC ACCAACGTAG TGGTCGACTC CGGCGCGCAC
CGCATCTTTA TGGCGCACCA TTGGCTGGCC AGCGGGCGTG GTGATTACCA TACCTCAAGT
TCCCTGGCAC CGATGGGCTG GGCTATTTGT GCCGGTATTG GCATCAAGCT TGCGGCACCG
CACCGCGACT GCGTGGTGGT CACCGGCGAC GGATGCATGT TGATGCACGG TATGGAGATC
CAGACCGCCG CCCGTTATCA GGTCAAAATG ACCTTTGTGG TGATGAACAA CTGCGCCCAC
GGGGCGATGC ATATCGACAC CTTGCAGAAC CGCGGCGTCT CGGCGGACTA CACGGCGTTG
CCAAACCACG ACTGGAAGGC CTTCGCCAAC AGTTTGGGAG TTTCTTCTGC CAGGGCGGCG
ACGCTGGAAG AGCTGGATGA GGCACTGGTC GCGGCGGCTG AGCACGAAGG CCCGTTCCTG
ATAGAAGTGT TGGTAGGAAA TCATGTGGCA CCTAATCGCT ACTATGCCGA GAGCATCGTA
GAATACGAGC AGCGTATCAA AGGCTTGTAA
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| Protein sequence | MESHAEKLYT PVALATADGV RVIATPGTKA AEQTNADVII QGLEARGIQH IFLVPGKLVY
PLIKSIEHSA ISGIVGAHET ACGFMADGYA RASRKFGVCL GISGPGTMNF LPAMAAAQAD
KIPVLYLAGG IATYHEAQGA FQDGSNSGID ELTIVKPLLS AAIEVKNNLT LQHELRRSLS
CLNTQRKGRA YLSVPVDMQK KTVAGNYEAS PQRTPQCREA AIDQQALEQV LDDYLLRGLN
VACLVGNRMN NPLDAALLLR LAEKYRLPVA TTLSGKGAFP EGHELALGLY GFAGHTRAVE
TINGDEVDVL LVLGCDLSQR DSLNWNSRLH GTKTLVVIDE DFDKVSSHYQ PDMQIFSSLT
DTLRHLLDAV SDEDQHLVAI KSLRNGWLEQ VRQLPLEQQQ PDLQARLALG EANMYPGDAI
KRIRSRMGPD TNVVVDSGAH RIFMAHHWLA SGRGDYHTSS SLAPMGWAIC AGIGIKLAAP
HRDCVVVTGD GCMLMHGMEI QTAARYQVKM TFVVMNNCAH GAMHIDTLQN RGVSADYTAL
PNHDWKAFAN SLGVSSARAA TLEELDEALV AAAEHEGPFL IEVLVGNHVA PNRYYAESIV
EYEQRIKGL
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