Gene Spro_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3218 
Symbol 
ID5606241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3545179 
End bp3546690 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content59% 
IMG OID640938761 
ProductABC transporter-related protein 
Protein accessionYP_001479444 
Protein GI157371455 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0134521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCC ATACGCCCTC ACGCCTTGAG ATGCGCAATA TCTCGATCGC CTTTGCCGGC 
TTCAACGCAC TGCAAAACGT CGACTTCACC CTGCAGGGCG GCTCTACCCA TGCGCTGGTC
GGCGCTAACG GTGCGGGTAA GTCCACGCTG ATGGCGATAC TTTCCGGCGC GCACAATCAT
TACCGCGGCG AGATCTTTAT CGACGGGCAA AAAGTGGATA TTCATTCGCC GCTGCAGGCT
CGTCAGTACG GGATCCATGT GGTGCAGCAG GAAGTGGATG TGGCGCTGAT CCCTACGCTG
TCGGTGGCGG AAAATATCAT GCTCGACTGG CTAAATGAGC CGGGGCATTT GCTGAACTGG
GCGCAACTGT ATCGCCAGGC GGCGCAGTTA CTGGCCCAGT TGGATCTAAC CATTAACCTG
CGTCAGCGAT TGACAGAGTG CACGCTGGCG GAAAAACAGC AGGTGTTGCT GGCGCGTGCG
TTGTCCCACC GCTGCCGTTT CCTGGTGCTC GATGAACCTA CCGCCCCGCT CGATCGCGCC
GAAAGCGAAC GGCTGTTCCG CGTGGTGCGC CGCCTTAAGT CCGAAGGCAT TGGCGTGGTG
TTTATTTCGC ACCGTATTCA TGAACTGAGT GAGATCTGCG ACCGCCTGAC GGTGCTACGT
GATGGCCGCC ACGTCAGCGA AGACGCCATG CAGGGCCTGA GCGGTGAGCA GATAGTCGAG
AAAATGCTCG GTCATCAATT GAATGATATC TTCCCGCCGC CGCGCCCACC GCACGGTTCC
CGCCCGCTGC TGCAGGTGGA GGGTCTGAGC GATCGTCACA AGCTGCGCGA CATCAGCCTG
CGGCTGTATC AGGGGGAAAT CCTCGGCATT GCCGGGCTGG CCGGGGCAGG CAAAACCGAA
CTGTGCAAGG CGCTGTTTGG CGCCACGCCG GCACGGGTTG AACAAGGCGA ACTGCTGGGT
AAACCCTGGG CCCCGCGTGC GCCACACCTT AGCGTTGAAC AAGGGCTGGC ACTGGTGCCG
GAGGAACGGC GTAAAGAAGG CATTTTTATT GATGAAGCCA TCCCGATGAA TCTGAGCGTC
AGCGCCGACG ACAGTTTTTC ACGCTGGAGC CTGTTCAGCC GTCGTCAGGA ACTGCGCTGG
GCGCGGGATA TCATGCAGCG CCTGAATATT CGCGCCTCCG GTCCACAGCA GCGGCTGGCC
AGGCTTTCCG GCGGCAACCA GCAAAAAGTG GCCATTGGCA AATGGTTACG TGGCGACGCC
AAAGTGCTGA TTTTCGATGA ACCCACCAAG GGCGTGGATA TCAAGGCCAA ACAGGAATTA
TTCACCCTGA TCGATGGGCT GGCCCGCGAC GGCAAAGGCA TTATCTATGC TTCCGGCGAG
TTTTCGGAGC TGGTCGGTTT ATGCGATCGC ATCTGCGTGC TGTGGGATGG CCGGGTAGTG
GCGGAACTTG ACGCCGCCGA GATTGATGAA GAAACCCTAT TACTGTATTC CACCGGAGGA
ACCCCAGCGT GA
 
Protein sequence
MPTHTPSRLE MRNISIAFAG FNALQNVDFT LQGGSTHALV GANGAGKSTL MAILSGAHNH 
YRGEIFIDGQ KVDIHSPLQA RQYGIHVVQQ EVDVALIPTL SVAENIMLDW LNEPGHLLNW
AQLYRQAAQL LAQLDLTINL RQRLTECTLA EKQQVLLARA LSHRCRFLVL DEPTAPLDRA
ESERLFRVVR RLKSEGIGVV FISHRIHELS EICDRLTVLR DGRHVSEDAM QGLSGEQIVE
KMLGHQLNDI FPPPRPPHGS RPLLQVEGLS DRHKLRDISL RLYQGEILGI AGLAGAGKTE
LCKALFGATP ARVEQGELLG KPWAPRAPHL SVEQGLALVP EERRKEGIFI DEAIPMNLSV
SADDSFSRWS LFSRRQELRW ARDIMQRLNI RASGPQQRLA RLSGGNQQKV AIGKWLRGDA
KVLIFDEPTK GVDIKAKQEL FTLIDGLARD GKGIIYASGE FSELVGLCDR ICVLWDGRVV
AELDAAEIDE ETLLLYSTGG TPA