Gene Spro_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3214 
SymbolsbcB 
ID5606186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3539217 
End bp3540644 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content57% 
IMG OID640938757 
Productexonuclease I 
Protein accessionYP_001479440 
Protein GI157371451 
COG category[L] Replication, recombination and repair 
COG ID[COG2925] Exonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.650627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0240807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGCA AGGCACCGGC CACATTCTAC ATCCACGACT ACGAGACCTT CGGCATAAGC 
CCATCGATGG ACCGCCCGGC GCAGTTTGCC GGCGTGCGTA CCGATATGGA TTTCAATATT
ATCGAAGAGC CGCTGGTCAT CTACTGCACC CCGGCCGATG ATTACCTGCC CGATCCCGAA
GCGGTGATGA TCACCGGTAT TACGCCGCAA CTGGCACTGG CCAAGGGCGT TAACGAAGCC
GAGTTTACAC GGCAAATTCA TCAGGCATTC AGCGTGCCCG GCACCTGTAT TCTGGGTTAC
AACAATATCC GCTTTGATGA CGAAGTCAGT CGCAATATTT TCTACCGCAA CTTCTACGAT
CCCTATGCTT ACAGTTGGCA GAATGGCAAC TCACGCTGGG ATCTGCTCGA CGTTATGCGT
GCCTGTTATG CACTGCGCCC GGACGGCATC GTCTGGCCGG AGAACGAAGA TGGCTTCCCC
AGCTTCCGTC TGGAGCACCT GACCCGCGCC AACGGCGTCG AACATGAACA TGCCCATGAC
GCCATGTCGG ACGTTTACGC CACCATTGCC ATGGCCAAAC TGGTCAAGCA GGCGCAGCCA
CGGTTATTTG ATTTCCTGTT GCAGCACCGC AACAAACATA AGCTGAACGC GCTGATCGAC
ATCGCAGAAA TGACGCCGTT GGTACACGTT TCCGGCATGT TCGGCGCGGC ACGTGGCAAC
ACCAGTTGGG TATCGCCGCT GGCCTGGCAC CCGGACAACA AGAACGCGGT GATCATGTGC
GATTTGGCCG GTGATATGAC GCCATTGCTG ACGCTGAGCG CCGACGAGCT GCGTGAACGG
CTGTATACCC GCCGTGAAGA TCTGGCCCCC GGCCAATCGC CGGTGCCGAT CAAACTGGTA
CATATCAACA AATGTCCGGT GCTGGCACCG GCGAAAACCC TGTTGCCGGA AAATGCCGAG
CGGCTGGGTA TCGATCGTCA GGCCTGCCTG CAAAACCTGC AGCTGCTGCG CCAGCATCCG
CAAGTGCGCG AAAAAGTGGT CGCACTGTTC GCCGATGCCG AGCCTTTCAA GGGTTCTGAT
GATGTCGATG CGCGGCTGTA CGACGGTTTC TTCAGCGATG CCGATAAGGC AACGATGAAA
ATTATCCAGC AAACCAAGCC GCAGAACCTG CCGGCGCTGG ATTTGACCTT CAACGATGGC
CGTCTGAAAG AGCTGCTGTT CCGCTTCCGC GCCCGCAATT ACCCCAATAC GCTCGATGAC
ACCGAGCAAC GCCGCTGGTT ACAGCATCGT CAGGAAGCCT TAAGCGCCGA GCGGGTGCAG
AGCTATGTCC TGCAACTGGA GTCGCTGTAT AACCTGCATG AAGGCGATCA AGAGAAGACC
GCGCTGTTGA AAGCGCTGTT TGAATACGGC AAAGAGCTGG TCGGCTGA
 
Protein sequence
MSSKAPATFY IHDYETFGIS PSMDRPAQFA GVRTDMDFNI IEEPLVIYCT PADDYLPDPE 
AVMITGITPQ LALAKGVNEA EFTRQIHQAF SVPGTCILGY NNIRFDDEVS RNIFYRNFYD
PYAYSWQNGN SRWDLLDVMR ACYALRPDGI VWPENEDGFP SFRLEHLTRA NGVEHEHAHD
AMSDVYATIA MAKLVKQAQP RLFDFLLQHR NKHKLNALID IAEMTPLVHV SGMFGAARGN
TSWVSPLAWH PDNKNAVIMC DLAGDMTPLL TLSADELRER LYTRREDLAP GQSPVPIKLV
HINKCPVLAP AKTLLPENAE RLGIDRQACL QNLQLLRQHP QVREKVVALF ADAEPFKGSD
DVDARLYDGF FSDADKATMK IIQQTKPQNL PALDLTFNDG RLKELLFRFR ARNYPNTLDD
TEQRRWLQHR QEALSAERVQ SYVLQLESLY NLHEGDQEKT ALLKALFEYG KELVG