Gene Spro_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3138 
Symbol 
ID5605040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3453445 
End bp3454647 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID640938681 
Productmajor facilitator transporter 
Protein accessionYP_001479366 
Protein GI157371377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACGA CGACTACATC GGCTTCAAGC AGGAACACGG AAACCCTGCC TATCGCGGCA 
CTGCTTGCCC TAGCGATGGC AGCCTTTATC ACGCTGTTGA CCGAAATCAT GCCGGCAGGA
TTGCTTTCCT CCATCGCGGG GGGTTTGAAT GTATCCGAAA GTTTGGCCGG TCAGTTCATC
ACTGCCTACG CGGTGGGGGC ACTGGTCGCT GCTATTCCAG TGACAACCCT TACGCAGGGT
ATGCGGCGGC GTCCTTTGCT GTTGGTGGCG ATCTTTGGGT TTTCGCTTGT CAATCTCGTC
ACCGCGCTTT CCGATAGCTA TAGCATCTCA TTGGTAGCGC GCTTCTTTGC CGGTGTCTTC
GGTGGCATTG TTTGGTCGCT GCTAGCCGGC TTTGCTGTAC GCATCTCACC ATCTCATCTC
AGCGGGCGGG CGATTGCGAT ATCCGGCGCT GGCGCGACCA TAGCTTTGGT GTTCGGCGTA
CCGCTCGGCG CGTTGCTTGG TCGAACCATT GGCTGGCAAG GTGCTTTTGG TCTGATGACT
GTCCTGGCAC TGGCGCTCAT CGTATGGGTT ATCGCCGTCG TTCCGGATTT TCCCGGTCAG
ACCAAGGAGC AGCGCCAGCC TCTTACAGGA GTCTTTCTAA AGACTGGCAT TCGTGCCGTA
CTGTTTGTGG TCTTTACCTT CGTTGTCGCT CACAACATTC TCTATATCTA CATTGAGCCC
CTCCTCGAAC CCTCGGGCTT GTCCGCGGAT GTAGATATTG TTCTGTTCGT CTTCGGAATA
GGCTCAATCA TTGGCCTGTG GTTCGTCGGC TCAATGGTTG ATCGCCGACT GCAACTCCTT
GCTGTTGCAA GCATCGTGGT CTTCGCTCTT GCTTCCCTGC TACTTGCTTT TTGGGGTGGC
CTTCCAAAGA TGGTTTATTC TTCCGTCGTG ATCTGGGGAA TGGCCGTGGG TGGATTTGCT
ACGATCACCC AAACGGCATT GTCTCGTTTT GCCGGTGAAT CGGTCGATGT CGCGCAATCT
ATGTATACGA CTGGTTGGAA CAGCGCCGTT GCCGCCGGCG GGATTGTCGG AGGTATTTTG
CTGGATCGAA CAGGCTTGGC GTCCTTTGCA TGGGGTGTTA TCGGACTTCT ACTCCTCTCG
TTGTTAGGCA CGATTCTCGC AATGAACAGG GCGTTATCGC AAAAGGCCGA AAACACGATG
TGA
 
Protein sequence
MHTTTTSASS RNTETLPIAA LLALAMAAFI TLLTEIMPAG LLSSIAGGLN VSESLAGQFI 
TAYAVGALVA AIPVTTLTQG MRRRPLLLVA IFGFSLVNLV TALSDSYSIS LVARFFAGVF
GGIVWSLLAG FAVRISPSHL SGRAIAISGA GATIALVFGV PLGALLGRTI GWQGAFGLMT
VLALALIVWV IAVVPDFPGQ TKEQRQPLTG VFLKTGIRAV LFVVFTFVVA HNILYIYIEP
LLEPSGLSAD VDIVLFVFGI GSIIGLWFVG SMVDRRLQLL AVASIVVFAL ASLLLAFWGG
LPKMVYSSVV IWGMAVGGFA TITQTALSRF AGESVDVAQS MYTTGWNSAV AAGGIVGGIL
LDRTGLASFA WGVIGLLLLS LLGTILAMNR ALSQKAENTM