Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3062 |
Symbol | |
ID | 5604232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3372329 |
End bp | 3373231 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640938603 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001479291 |
Protein GI | 157371302 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAAAA TAGGGAGATT GCGGGTCTTT ATCCAGGTGG CCGAAGTGGG CAGTTTTATC CGGGCTTCGC AGATCCTGCT GATGCCAAAA ACCACGGTTT CGGCCGCGAT ACAGCAATTG GAACATGAAA TGGGCACTCG CCTGTTTCAT CGCACCACTC GCCGGGTACA ACTGACCAGC GACGGTGAAC TGTTGCTCGA AAAGGCACGC AGCCTGCTGT TTGACGTGCA GGCATTGGAA AGTCTGTTTC ACCGGCAGAA CGGCCCGATC GGGGGACGTT TGACGGTCGA TGTCCCCAGC CGTATCGCCC GGAGAATGAT CGTGCCGGCG CTGCCGGACT TTTTTCTGCA GTATCCCGAA ATCCAACTGT TTCTCAGCGC CAGCGACCGT TCAGTCGATC TGATCCAGGA AGGGATCGAT TGCGTGGTGC GCGTCGGCAA TCTCAGCGAC AGCAGTCTGG TCAGCCAGCC GCTGGGCCGT CTGAGTATGA TCAACTGTGC CAGTCCGGAT TATTTGCAGC GCTACGGGAC CCCGGAGCAT CCTGACCAAT TGGAAGATCA CTGGGTGGTG GGCTATGCGC AGCCGACCCT GGCAGGGGCG GATAGCTGGC AGTGGCAGCA GGATGGACAG CATTTTGAGA AAACGTTGCC TAATCGGGTG ACGGTGAACA ATGTGGAAAA CTACATCGGC TGTTGCCTGG TGGGGTTGGG AATGATGCAG ATACCGCGTT TTGATGTTCA ACACTACCTG GATAACGGTA GCCTGTGCGA GATCTTGCCG CAGGCCCGGC CACCGGCAAT GAGCATGGCT TTGCTTTATC CCCATCGTCG TCAGCGTTCG GCGCGTTTAA CCGCCTTTTC CGAGTGGTTC AGCCAGTTAA TCAAGCCGTT TTGCGAAACC TGA
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Protein sequence | MDKIGRLRVF IQVAEVGSFI RASQILLMPK TTVSAAIQQL EHEMGTRLFH RTTRRVQLTS DGELLLEKAR SLLFDVQALE SLFHRQNGPI GGRLTVDVPS RIARRMIVPA LPDFFLQYPE IQLFLSASDR SVDLIQEGID CVVRVGNLSD SSLVSQPLGR LSMINCASPD YLQRYGTPEH PDQLEDHWVV GYAQPTLAGA DSWQWQQDGQ HFEKTLPNRV TVNNVENYIG CCLVGLGMMQ IPRFDVQHYL DNGSLCEILP QARPPAMSMA LLYPHRRQRS ARLTAFSEWF SQLIKPFCET
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