Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2796 |
Symbol | |
ID | 5602463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3076036 |
End bp | 3077241 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640938337 |
Product | multidrug resistance protein MdtH |
Protein accession | YP_001479025 |
Protein GI | 157371036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.141154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCTGG TATCGCAAGC TCGGAGCTTG GGTAAGTATT TTCTATTACT CGATAACCTG TTAGTGGTTT TAGGCTTTTT TGTAGTCTTT CCACTTATTT CGATTCGCTT TGTCGATCAG CTTGGCTGGG CGGCCGTGGT GGTCGGTGCC GCACTGGGTT TACGGCAATT AATCCAACAG GGATTGGGCA TTTTTGGCGG AGCAATCGCC GACCGATTTG GTGCCAAACC GATGATTGTC ACCGGCATGC TGATGCGCGC GGCCGGTTTC GCCACCATGG CAATGGCCGA TCAGCCCTGG CTGCTGTGGT TCTCCTGCGC CCTTTCCGCC CTCGGTGGCA CCTTGTTTGA CCCACCGCGC ACCGCGCTGG TGATTAAGCT CACCCGTCCG CATGAGCGCG GCCGTTTTTA CTCTCTGTTA ATGATGCAGG ACAGTGCCGG GGCGGTGATT GGCGCCCTGA TCGGCAGTTG GCTGCTGCAA TATGATTTCC ACTTCGTTTG CTGGGTCGGC GCGGGCATTT TCGTGTTGGC CGCGGGTTGG AACGCCTGGC TGCTGCCGGC ATACCGTATT TCTACCGTCC GCACCCCAAT GAAGGAAGGC ATGATGCGCG TACTGCGCGA CCGCCGTTTC CTGACCTACG TGCTGACGCT GACCGGCTAC TACATGCTGT CGGTACAGGT GATGCTGATG CTGCCGATCG TGGTCAATGA AATCGCCGGT TCACCCACGG CGGTAAAATG GATGTATGCC ATCGAAGCCG CGCTGTCGCT GTCACTGCTG TATCCACTGG CTCGCTGGAG TGAAAAACGT TTTCGGCTGG AGCAACGCTT GATGGCCGGC CTGCTGCTGA TGACCCTCAG CCTGATGCCG GTTGGGCTGG CAACCAGCCT GCAGGGCGTC TTTACCCTGA TCTGCTGTTT CTATCTCGGT TCCATTATCG CCGAACCGGC GCGTGAAACC CTCAGCGCCT CGCTGGCCGA TCCCCGCGCA CGCGGCAGTT ACATGGGGTT CAGCCGCCTG GGGCTGGCAT TGGGCGGCGC ACTGGGTTAC ACCGGTGGCG GCTGGATGTA CGACACCGGC CACTCGATGA ACATGCCGGA ACTGCCGTGG ATACTGCTGG GTATCGTAGG CTTTATTACC CTGTTTGCAC TTTACTGGCA GTTCAACCCG CGCAGCAGCG CACCGGCAGT TGCCCCCGGC GGCTAA
|
Protein sequence | MSLVSQARSL GKYFLLLDNL LVVLGFFVVF PLISIRFVDQ LGWAAVVVGA ALGLRQLIQQ GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMAMADQPW LLWFSCALSA LGGTLFDPPR TALVIKLTRP HERGRFYSLL MMQDSAGAVI GALIGSWLLQ YDFHFVCWVG AGIFVLAAGW NAWLLPAYRI STVRTPMKEG MMRVLRDRRF LTYVLTLTGY YMLSVQVMLM LPIVVNEIAG SPTAVKWMYA IEAALSLSLL YPLARWSEKR FRLEQRLMAG LLLMTLSLMP VGLATSLQGV FTLICCFYLG SIIAEPARET LSASLADPRA RGSYMGFSRL GLALGGALGY TGGGWMYDTG HSMNMPELPW ILLGIVGFIT LFALYWQFNP RSSAPAVAPG G
|
| |