Gene Spro_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2796 
Symbol 
ID5602463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3076036 
End bp3077241 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID640938337 
Productmultidrug resistance protein MdtH 
Protein accessionYP_001479025 
Protein GI157371036 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.141154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGG TATCGCAAGC TCGGAGCTTG GGTAAGTATT TTCTATTACT CGATAACCTG 
TTAGTGGTTT TAGGCTTTTT TGTAGTCTTT CCACTTATTT CGATTCGCTT TGTCGATCAG
CTTGGCTGGG CGGCCGTGGT GGTCGGTGCC GCACTGGGTT TACGGCAATT AATCCAACAG
GGATTGGGCA TTTTTGGCGG AGCAATCGCC GACCGATTTG GTGCCAAACC GATGATTGTC
ACCGGCATGC TGATGCGCGC GGCCGGTTTC GCCACCATGG CAATGGCCGA TCAGCCCTGG
CTGCTGTGGT TCTCCTGCGC CCTTTCCGCC CTCGGTGGCA CCTTGTTTGA CCCACCGCGC
ACCGCGCTGG TGATTAAGCT CACCCGTCCG CATGAGCGCG GCCGTTTTTA CTCTCTGTTA
ATGATGCAGG ACAGTGCCGG GGCGGTGATT GGCGCCCTGA TCGGCAGTTG GCTGCTGCAA
TATGATTTCC ACTTCGTTTG CTGGGTCGGC GCGGGCATTT TCGTGTTGGC CGCGGGTTGG
AACGCCTGGC TGCTGCCGGC ATACCGTATT TCTACCGTCC GCACCCCAAT GAAGGAAGGC
ATGATGCGCG TACTGCGCGA CCGCCGTTTC CTGACCTACG TGCTGACGCT GACCGGCTAC
TACATGCTGT CGGTACAGGT GATGCTGATG CTGCCGATCG TGGTCAATGA AATCGCCGGT
TCACCCACGG CGGTAAAATG GATGTATGCC ATCGAAGCCG CGCTGTCGCT GTCACTGCTG
TATCCACTGG CTCGCTGGAG TGAAAAACGT TTTCGGCTGG AGCAACGCTT GATGGCCGGC
CTGCTGCTGA TGACCCTCAG CCTGATGCCG GTTGGGCTGG CAACCAGCCT GCAGGGCGTC
TTTACCCTGA TCTGCTGTTT CTATCTCGGT TCCATTATCG CCGAACCGGC GCGTGAAACC
CTCAGCGCCT CGCTGGCCGA TCCCCGCGCA CGCGGCAGTT ACATGGGGTT CAGCCGCCTG
GGGCTGGCAT TGGGCGGCGC ACTGGGTTAC ACCGGTGGCG GCTGGATGTA CGACACCGGC
CACTCGATGA ACATGCCGGA ACTGCCGTGG ATACTGCTGG GTATCGTAGG CTTTATTACC
CTGTTTGCAC TTTACTGGCA GTTCAACCCG CGCAGCAGCG CACCGGCAGT TGCCCCCGGC
GGCTAA
 
Protein sequence
MSLVSQARSL GKYFLLLDNL LVVLGFFVVF PLISIRFVDQ LGWAAVVVGA ALGLRQLIQQ 
GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMAMADQPW LLWFSCALSA LGGTLFDPPR
TALVIKLTRP HERGRFYSLL MMQDSAGAVI GALIGSWLLQ YDFHFVCWVG AGIFVLAAGW
NAWLLPAYRI STVRTPMKEG MMRVLRDRRF LTYVLTLTGY YMLSVQVMLM LPIVVNEIAG
SPTAVKWMYA IEAALSLSLL YPLARWSEKR FRLEQRLMAG LLLMTLSLMP VGLATSLQGV
FTLICCFYLG SIIAEPARET LSASLADPRA RGSYMGFSRL GLALGGALGY TGGGWMYDTG
HSMNMPELPW ILLGIVGFIT LFALYWQFNP RSSAPAVAPG G