Gene Spro_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2728 
Symbol 
ID5606796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3004661 
End bp3005656 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content50% 
IMG OID640938269 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001478957 
Protein GI157370968 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0444249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00134617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTTCGTGCT 
GCTCAAGAAC GTTCTGACAT CGAAATCGTT GCAATCAACG ACCTGTTAGA CGCAGAGTAC
ATGGCTTACA TGCTGAAATA TGACTCTACT CACGGCCGCT TCAACGGCAC TGTAGAAGTT
AAAGACGGCC ACCTGGTTGT TAACGGTAAA ACCATCCGTT GTACCTCAGA AAGAGATCCG
GCTAACCTGA AGTGGAACGA AGTCAACGTT GACGTCGTTG CTGAAGCAAC TGGCCTGTTC
CTGACTGACG AAACTGCACG TAAACACATC GCTGCAGGCG CTAAGAAAGT TGTTCTGACT
GGCCCATCCA AAGACGACAC CCCAATGTTC GTTATGGGTG TTAACCACAA ATCCTACGCT
GGCCAGGAAA TCGTTTCTAA CGCTTCTTGC ACCACCAACT GCCTGGCACC ACTGGCTAAA
GTTATCAACG ACAAGTTCGG TATCGTTGAA GCTCTGATGA CCACTGTGCA TGCAACTACC
GCAACTCAGA AAACTGTTGA TGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCA
TCCCAGAACA TCATCCCTTC TTCTACCGGT GCTGCTAAAG CAGTAGGTAA AGTTATCCCA
GAACTGAACG GCAAACTGAC CGGTATGGCG TTCCGCGTTC CAACTCCGAA CGTGTCTGTG
GTTGACCTGA CTGCTCGTCT GGCAAAACCA GCTTCTTACA AAGAAATCTG TGCTGCTATC
AAAGCCGCTT CTGAAGGCGA GCTGAAAGGC GTACTGGGTT ACACCGAAGA CGAAGTGGTT
TCTACCGATT TCAACGGCGA AACTCTGACT TCCGTATTCG ATGCCAAAGC CGGTATCGCT
CTGAGCGACA CCTTCGTGAA ACTGGTTTCC TGGTACGACA ACGAAACCGG CTATTCCAAC
AAGGTTCTGG ATCTGATCGC TCACATCTCC AAATAA
 
Protein sequence
MTIKVGINGF GRIGRIVFRA AQERSDIEIV AINDLLDAEY MAYMLKYDST HGRFNGTVEV 
KDGHLVVNGK TIRCTSERDP ANLKWNEVNV DVVAEATGLF LTDETARKHI AAGAKKVVLT
GPSKDDTPMF VMGVNHKSYA GQEIVSNASC TTNCLAPLAK VINDKFGIVE ALMTTVHATT
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVIP ELNGKLTGMA FRVPTPNVSV
VDLTARLAKP ASYKEICAAI KAASEGELKG VLGYTEDEVV STDFNGETLT SVFDAKAGIA
LSDTFVKLVS WYDNETGYSN KVLDLIAHIS K