| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2710 |
|---|
| Symbol | |
|---|
| ID | 5606626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2986845 |
|---|
| End bp | 2987858 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640938249 |
|---|
| Product | response regulator of RpoS |
|---|
| Protein accession | YP_001478939 |
|---|
| Protein GI | 157370950 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.317611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000232648 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAC CATTGACTCA CAAGCGCATT TTGGTCGTTG AGGACGAACT GGTTTTTCGT
TCCGTGCTTG TTGGCTATTT GAAATCGTTG GGGGCGGAAA CCAGTGAGGC CCCCAATGGT
TTGCAGGCGT TGAGTCTGGT GGATGATGTT CATCCCGATT TAATCCTGTG CGATCTGGCG
ATGCCGGAAA TGGATGGGAT TGAGTTTGTC GAACATCTGC GGCTGCAAGG AGTGCAAACT
CCGGTGTTGG TGATTTCGGC TACCGATAAA ATGGCCGATA TCGCCAAAAT GTTGCGGTTA
GGCGTTCAGG ACGTATTGTT AAAACCGGTG ACCGACCTTA ATCGTCTGCG TGAAGCGGTG
TTGGGGTGTC TGTATCCCAA TATGTTCACT TCGCCGGCCA TTGAGGAGGT GGAACTGTTC
CAGGACTGGG ATGCGCTGAG TAAAAATCCT TCCGAAGCGG TGAAGTTGCT CAAACAGTTA
CAGCCACCGG TGCAGCAGAC CGTGGCTCAT TGCCGGATTA ATTATCGGCA ATTAACCACT
AGCGAGAATC CGGGACTGGT GCTGGATATT GCGGCACTGT CGGATAAAGA CCTGGCGTTC
TATTGTCTGG ATGTGACCCG CGCAGGAGAT AATGGCGTAT TGGCGGCACT GCTGCTGCGC
GCATTATTTA ATGGATTGTT GCAAGATCAT TTAGCTAATC AGCGTCATCG GCTGCCGCAA
ATGAGCGCAT TGTTAAAGCA GGTTAATCAA TTATTACGTC AAGGCAAGCT GGAAGGGCAA
TTTCCGATGC TGGTCGGTTA TTATCACACC GAATATAAAA ACCTGATCCT GGTCTCCGCC
GGCCTGCATG CCAATGTAAA TACCGGTGAT AATCAAATTC AACTGAGCAA CGGTGTGCCA
CTGGGAACGC TGGGTGCGAC GTACATGAAT CAAATCAGTC AGCACTGTGC CGCCTGGCAG
TGCCAGGTTT GGGGCTCGGG TGGCAGGCTA CGCTTGATGC TCAGTGCTGA ATAA
|
|---|
| Protein sequence | MALPLTHKRI LVVEDELVFR SVLVGYLKSL GAETSEAPNG LQALSLVDDV HPDLILCDLA
MPEMDGIEFV EHLRLQGVQT PVLVISATDK MADIAKMLRL GVQDVLLKPV TDLNRLREAV
LGCLYPNMFT SPAIEEVELF QDWDALSKNP SEAVKLLKQL QPPVQQTVAH CRINYRQLTT
SENPGLVLDI AALSDKDLAF YCLDVTRAGD NGVLAALLLR ALFNGLLQDH LANQRHRLPQ
MSALLKQVNQ LLRQGKLEGQ FPMLVGYYHT EYKNLILVSA GLHANVNTGD NQIQLSNGVP
LGTLGATYMN QISQHCAAWQ CQVWGSGGRL RLMLSAE
|
|---|
| |