| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2701 |
|---|
| Symbol | |
|---|
| ID | 5606515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2973329 |
|---|
| End bp | 2974966 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640938240 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001478930 |
|---|
| Protein GI | 157370941 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.301975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00251286 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA TCACGAAAAA AACCATCCTT GCGGCCGGCA TCATTGCCGC GCTGGGTATC
ACAGCAACCG GAAGTGCTTT TGCGGCCGTT GTGCCGGCGG GCGTACAACT GGCAGACAAG
CAAGAGATAG TTAAAAACAA CGGTTCGGAA GTACAGTCGC TGGATCCGCA CAAAATTGAA
GGCGTACCTG AAAACAACGT TACGCGCGAT CTGATGGAAG GCCTGGCCAA CAACGGCCCG
GATGGTTCCA TTGTTCCAGG CGTGGCCGAA AGCTGGGATA ACAAAGATTT TAAAGTCTGG
ACCTTCCATC TGCGTAAAGA CGCAAAGTGG TCGAATGGCA AGCCGGTAAC GGCACAAGAT
TTCGTGTATA GCTGGCAGCG CGTGGTGGAC CCTAAAACTG CATCCCCATA TGCCAGCTAT
CTGCAATATG CTCACGTAGA AAACGTTGAT GACGTTATCG CCGGTAAAAA AGACAAGTCT
ACCCTGGGCG TAAAAGCCAT CGACGATCAC ACCTTCCAGG TCACCCTGAC CGAGCCGGTG
CCTTACCTGG TTGAAATGAC GCCGCACTAT GCGATGAAGC CAGTATTTAA AGACGCGGTC
GAGAAGTTTG GTGAGAAATG GACCCTGCCG GCGAATTACG TCAGCAATGG TGCCTACAAG
TTAAAAGACT GGGTCGTTAA CGAACGTATC GTGCTGGAAC GTAACCCGGA ATATTGGGAT
AACGCGAAAA CCATCATTAA TAAAGTCACG TTCCTGCCAA TTTCGTCGGA AGTGACCGAC
GTAAACCGCT ACCGCACCGG TGAAATCGAC ATGACCTATA ACAACATGCC GATTGAACTG
TTCCAAAAGT TGAAAAAAGA GATCCCGAAA GAAGTTCACG TCGATCCATA TCTGTGTACT
TATTACTACG AGATCAACAA CCAGAAAGCG CCGTTTACCG ATCAGCGCGT ACGTGAAGCG
CTGAAGCTGG GCCTGGATCG CGACATCATC ACCAATAAAG TGAAAAACCA GGGTGATTTG
CCGGCCTACA GCTTCACCCC ACCTTATACC GATGGTGCCA AGTTGACGCC ACCAGAGTGG
TTCGGCTGGA CGCAGGAAAA ACGCAACGAA GTGGCGAAAA AACTGCTGGC TGAAGCGGGT
TACGGCCCGG GCAAACCACT GACTTTCTCA CTGCTGTACA ACACTTCTGA TCTGCACAAA
AAACTGGCGA TCGCCGCAGC CTCCATCTGG AAGAAAAATC TGGGCGTGGA CGTGAAGCTG
GTGAACCAGG AGTGGAAAAC CTTCCTCGAT ACCCGTCATC AGGGTACCTA TGACGTAGCG
CGTGCCGGCT GGTGTGCCGA CTACAACGAA CCAAGCTCGT TCCTGAACAT GATGCTGTCC
GACAGCAGCA GTAACACCCC GCACTATAAG AGCGCGGAGT TCGATAAGCT GATGGCGAAC
GTGCTGACGG CGAAAACCAA AGAAGAACGA GCAGATCTGT ATCAGAAAGC CGAAGTGCAG
CTGGATAAGG ATTCGGCCAT CGTTCCGGTT TATTACTATG TGAATGCCCG TCTGGTGAAA
CCTTATGTTG GCGGTTACAC CGGTAAAGAC CCACTTGATA ACGTGTACGA CAAAAATCTG
TACATCATCA AGCATTGA
|
|---|
| Protein sequence | MTNITKKTIL AAGIIAALGI TATGSAFAAV VPAGVQLADK QEIVKNNGSE VQSLDPHKIE
GVPENNVTRD LMEGLANNGP DGSIVPGVAE SWDNKDFKVW TFHLRKDAKW SNGKPVTAQD
FVYSWQRVVD PKTASPYASY LQYAHVENVD DVIAGKKDKS TLGVKAIDDH TFQVTLTEPV
PYLVEMTPHY AMKPVFKDAV EKFGEKWTLP ANYVSNGAYK LKDWVVNERI VLERNPEYWD
NAKTIINKVT FLPISSEVTD VNRYRTGEID MTYNNMPIEL FQKLKKEIPK EVHVDPYLCT
YYYEINNQKA PFTDQRVREA LKLGLDRDII TNKVKNQGDL PAYSFTPPYT DGAKLTPPEW
FGWTQEKRNE VAKKLLAEAG YGPGKPLTFS LLYNTSDLHK KLAIAAASIW KKNLGVDVKL
VNQEWKTFLD TRHQGTYDVA RAGWCADYNE PSSFLNMMLS DSSSNTPHYK SAEFDKLMAN
VLTAKTKEER ADLYQKAEVQ LDKDSAIVPV YYYVNARLVK PYVGGYTGKD PLDNVYDKNL
YIIKH
|
|---|
| |