Gene Spro_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2681 
Symbol 
ID5606228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2950915 
End bp2952132 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID640938220 
Producthypothetical protein 
Protein accessionYP_001478910 
Protein GI157370921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.433082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00146512 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTCTT ACAAAGCAAG TTTACTGTCA GTCTCATTTA TGACCTACAT GGTGATGGCC 
GGACTCCTCA CTCAAATAGG CATTGTCATT AGTCCGATGT CTCAATATCT GGATATCAGT
ATTACGGACG CCGCGGCCAT GTTCTCGTAC CTGACCGGCG GTACTCTCCT GGGGACATTT
ATCTCGATGG TGGTGTATTC CCGATTTGAG ATCCGCCACA TTTTGCGAGC CACCTATGCA
ATTTTTCTGA TTGTTATGGC CGCATTGGTC TTTCTTGAGG TCAGAAATCC GTTTGTCGTC
TCGTTTTATC TCTTTGTTTT GGGAGCCTGC TGCGGTACCG GTTTGTCAGG CGGCGCCGTA
CTGATCTCCA AAGTTTTTGA TGAAAACAAA CGCGCTTCCG CCTTTATCGC CACCGACTGT
GCATTTAGCG CCTCAGGTTT TATTTTTCCA TCGGTGGCGA CAATGATCAT CGCTGCAAAC
ATGCAATGGA CCAATGCTTA CGGATTGGTC GGCATTATTG CCGCACTGGT GTTTATCAGC
ACCTTTGTTT TGCAATACCC GAAAGGGGAT TTGGCGGAAA ACACGAGAGG TGAAGCCAAC
GCCAGCGCTT CCGGATTTAA CTTCAAACAG ATTATGACCC CCAGAGTGAT TCTGATGGGG
TTAGCGCTGG GTATCTATCT GTTCGCCCAA AGCACTTTCC TGACCTGGTC GCCCAGCTAC
CTGCAGCAGG CGTTTGGTTT ATCTTCGACG GATTCCGGTG CGGCAGTGCG AAATTATTGG
GGGCCATCCG TGTTTGGCTT AATCGCCGCC GCCATATTAG TGAATAAGAT CCCCGCGAGG
GTCATGCTGG TGACGGTCTC TGTCATCGCC ATTGTCGTAA CCTTCTACTT AAGCATGACC
CATAGCCCGA AAGTCTTTTT GACCGCCACC CTGGGGTTCG GTTTCCTGAC CTCGTGTGTC
TATAAATTAG GGATTTCTGT TGGCTCTCAG CAGGTTAAAA ACTCACCCGC GGTGCTCGTC
ACCTTCTTGC TGACGTGCGG AACCCTTGGC AGCACCATTT CACCGGCCTT GTCTGCCGCC
ATGGTTGCGC GGTTCGGGGT TGCCAGTGCG ATGGTCATGA CCGCCCTGGG TTTTACTGCC
GTATGCGTTT GCGTTGTCGC CTGCCTGATC CTTGAGAAGG TTGAAAATTC CAAATCCACA
AAGGAAATAT ACTTATGA
 
Protein sequence
MSSYKASLLS VSFMTYMVMA GLLTQIGIVI SPMSQYLDIS ITDAAAMFSY LTGGTLLGTF 
ISMVVYSRFE IRHILRATYA IFLIVMAALV FLEVRNPFVV SFYLFVLGAC CGTGLSGGAV
LISKVFDENK RASAFIATDC AFSASGFIFP SVATMIIAAN MQWTNAYGLV GIIAALVFIS
TFVLQYPKGD LAENTRGEAN ASASGFNFKQ IMTPRVILMG LALGIYLFAQ STFLTWSPSY
LQQAFGLSST DSGAAVRNYW GPSVFGLIAA AILVNKIPAR VMLVTVSVIA IVVTFYLSMT
HSPKVFLTAT LGFGFLTSCV YKLGISVGSQ QVKNSPAVLV TFLLTCGTLG STISPALSAA
MVARFGVASA MVMTALGFTA VCVCVVACLI LEKVENSKST KEIYL