| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2535 |
|---|
| Symbol | |
|---|
| ID | 5604067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2788040 |
|---|
| End bp | 2789623 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640938074 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001478764 |
|---|
| Protein GI | 157370775 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.604854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATA CAGGTCTCAA CGCCGCCGGC TCAAAGCCAC GGTATACTTC CGCCCGCCGC
CATCAGCGGC CCGGGTTGTT TATCGTGGCG GTCGCCATTT TACTCTCCCT GCTGGCGCTA
TTGCCGCTGG GGTTTGTCAT TAGCGTGGCG TTTGAAACCG GTTGGCCAAC GGTAAAAGCT
CTGGTATTGC GCCCCCGGGT GGCCGAACTG CTGCTCAACA CGCTGCTGTT GGTGGTGTTC
ACGCTGCCGA TTTGCGCCAT TCTGGGGGTA GCGCTGGCCT GGCTAACCGA ACGCACTACG
CTGCCGGGCC GTCGCATTTG GTCGTTATTG GCCACCGCGC CGCTGGCGGT GCCGGCATTC
GTACAGAGCT ACGCCTGGAT CAGTCTGGTG CCTTCGATGC ATGGGTTGGG AGCCGGGGTA
TTTATTTCGG TCATCGCCTA CTTCCCCTTT ATTTATCTGC CAACCGCTGC GGTATTACGC
CGCTTGGATC CCGGAATTGA AGACGTCGCC ACTTCGCTCG GTACGCGCCC GCTGGCGGTA
TTTTTCCGCG TGGTGCTGCC ACAGCTAAAA CTGGCAGTTT GGGGTGGCTC GCTGCTGATC
GCACTGCATC TGCTGGCCGA GTACGGCCTG TATGCGATGA TCCGCTTTGA CACCTTCACT
ACCGCTATTT TCGACCAGTT CCAATCGACC TTTAACGGCC CGGCGGCCAA TATGCTGGCC
GGGGTGCTGG TGCTGTGCTG CCTGGGATTA TTAATGCTGG AAGCCGTCAG CCGTGGGCGA
GCGCGTTATG CCCGCGTCGG TTCCGGCAGT GCGCGCAGTC AAACGGCTTA TCGCCTTGGG
CCCATCACCA CCCTGTTCTG CCTGCTGCTG CCCCTGAGCC TCACCGCGCT GGCGCTTGGC
GTGCCTTTTA TCACCTTGGC CCGTTGGTTG ACCTTGGGAG GCGTTGAGGT GTGGCGCAAC
AGCGAATTGC TGCCTGCCTT GCTGCAAACA TTGTCACTGG CCGCCAGTGG TGCGCTGCTG
ATCACGCTGT GCGCTATCCC TATGGCCTGG CTGTCGGTAC GCTACCCGGC ACGGCTGTAT
CGGGTATTGG AAGGCTGTAA TTACATCACC AGTTCACTGC CCGGCATTGT GGTGGCACTG
GCGCTGGTGA CCATCACCAT TCACAGTTTT CGACCGATTT ATCAGACTGA AATCACCCTG
CTGCTGGCCT ACCTGCTGAT GTTTATGCCA CGGGCGCTGA TCAACCTGCG CGCGGGGATT
GCCCAGGCAC CGGTCGAGTT AGAAAACGTG GCCCGTAGTC TCGGTCGTTC GCCAGCGGCA
GCATTATGGA GCACCACGCT GCGTCTGGCG GCCCCCGGAG CCGCCGCCGG TGCCGCACTG
GTGTTTCTGG CTATCACCAA TGAGCTGACC GCCACGCTGC TGCTGGCCCC CAACGGTACC
CGCACGCTGG CCACCGGCTT CTGGGCGCTG ACCAGCGAGA TAGACTATAT GGCGGCCGCA
CCCTACGCCC TGATTATGGT GGTGTTGTCA TTGCCACTGA CCTGGCTTCT TTATTCTCAA
TCCAAACGTA CGGCGGGATT ATGA
|
|---|
| Protein sequence | MSNTGLNAAG SKPRYTSARR HQRPGLFIVA VAILLSLLAL LPLGFVISVA FETGWPTVKA
LVLRPRVAEL LLNTLLLVVF TLPICAILGV ALAWLTERTT LPGRRIWSLL ATAPLAVPAF
VQSYAWISLV PSMHGLGAGV FISVIAYFPF IYLPTAAVLR RLDPGIEDVA TSLGTRPLAV
FFRVVLPQLK LAVWGGSLLI ALHLLAEYGL YAMIRFDTFT TAIFDQFQST FNGPAANMLA
GVLVLCCLGL LMLEAVSRGR ARYARVGSGS ARSQTAYRLG PITTLFCLLL PLSLTALALG
VPFITLARWL TLGGVEVWRN SELLPALLQT LSLAASGALL ITLCAIPMAW LSVRYPARLY
RVLEGCNYIT SSLPGIVVAL ALVTITIHSF RPIYQTEITL LLAYLLMFMP RALINLRAGI
AQAPVELENV ARSLGRSPAA ALWSTTLRLA APGAAAGAAL VFLAITNELT ATLLLAPNGT
RTLATGFWAL TSEIDYMAAA PYALIMVVLS LPLTWLLYSQ SKRTAGL
|
|---|
| |