| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2422 |
|---|
| Symbol | |
|---|
| ID | 5604623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2654251 |
|---|
| End bp | 2655282 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640937961 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_001478651 |
|---|
| Protein GI | 157370662 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3376] High-affinity nickel permease |
|---|
| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.178325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAACC GCGAGTTTTT CCACACCCAT ACCCGCGCCT TTTGGCTATT ACTGGCGCTG
GTGGCGCTAA ACCTGTTGGC CTGGGGAGCG GCTTTTGCCG CATTCCATCA CTACCCGGCG
TTAATCGCTG CCGCTTTGCT GGCTTATGGC TACGGGCTGC GTCATGCGGT AGATGCCGAT
CATATCGCCG CTATTGATAA CGTCACCCGC AAACTGATGC AGCAAGGCCA GCGCCCGGTT
TCCGTCGGCG CATTCTTCTC TTTGGGCCAC TCCAGCATTG TGATCCTGGC CTGCATCGCC
ATTGCCGCCA CTTCATTGGC ATTTGGCGAT CGTATTGGCT GGCTGCATCA GTACGGCGCG
ACACTGGGCA CGCTGATCTC CTCGCTGTTC CTGTTGGCCA TGGCACTATT GAACTGGCTG
ATTTTCCGAG ACGTTTACCG AATTTTCCGC CAGGTGAAAC GCGGGGAAAA ACTGGTGGAA
CAAGATGTCG CCCTGCTGGT TAACGGGAGC GGCGGCGTGA TGACACGTCT GTATCGCTTC
GCTTTTAATC TGGTGAATAA AAGCTGGCAT ATGTATCTGG TCGGCTTTTT ATTTGGCCTG
GGTTTTGACA CCGCCACCGA AGTCGGCCTG TTGGGCATCT CCGCGGCCGG TGCCACTTCC
GGCCTGTCGG TCTGGTCGAT TATGCTGTTC CCGTTGCTGT TCGCCAGCGG CATGGCGTTG
ATTGACTCGC TGGATAATTT TGTGATGGTT GGCGCTTATG GCTGGGCCTT CAATAAACCG
ATCCGCAAGC TGTATTACAA CATGACCATT ACCGCTACCA GCGTGGCTAT TGCTCTGGTG
ATCGGTGGCC TGGAAGGTTT GGGGTTGTTG GTCGACAAAC TTGGGTTACA AGGCGGGCTG
TGGCGCGGTG TTGAAGTCCT CAATGACCAT ATGGGTAGCG TGGGTTACGC CGCTATCGCA
TTATTTGTGG TGCTGTGGGC GTTGTCCGCG CTGAATTACC GCCGCAAAAA CTATGACTCG
CTGACCCTCT AG
|
|---|
| Protein sequence | MVNREFFHTH TRAFWLLLAL VALNLLAWGA AFAAFHHYPA LIAAALLAYG YGLRHAVDAD
HIAAIDNVTR KLMQQGQRPV SVGAFFSLGH SSIVILACIA IAATSLAFGD RIGWLHQYGA
TLGTLISSLF LLAMALLNWL IFRDVYRIFR QVKRGEKLVE QDVALLVNGS GGVMTRLYRF
AFNLVNKSWH MYLVGFLFGL GFDTATEVGL LGISAAGATS GLSVWSIMLF PLLFASGMAL
IDSLDNFVMV GAYGWAFNKP IRKLYYNMTI TATSVAIALV IGGLEGLGLL VDKLGLQGGL
WRGVEVLNDH MGSVGYAAIA LFVVLWALSA LNYRRKNYDS LTL
|
|---|
| |