Gene Spro_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2404 
Symbol 
ID5604476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2626393 
End bp2626875 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID640937943 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001478633 
Protein GI157370644 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCG TATTGTTACC CCCGCATCTG GCAGAGAAAT TAACGCCGAA CGAGCGTATG 
GTGCTGCAGG CCCTGCTCAA CGGGCAGGAC CTGACTACCA TTGCCCAACG GCGTAACCGC
AATATCCGCA CCGTCAGCAA CCACAAACAA CGGGCGATGG AAAAACTGGG CCTGAACAAC
AACGCCATGC TGTATGCGCT GGCCGCCCTG CTGAGCCCGC CCTTGCCGCA GGCCTCCCCT
CAGCAAATGC AGTCGCTCTC ACCGCGGGAG CATCGGGTGC TGGCGGGCCT GCTGCAGGGT
AAAACGGTGG GCGCGATTGC CCGCGAGCAG CATAAAAGCA TCAAAACCAT CAGCCTGCAA
AAGCAGCGGC TGATGGAGAA ACTGAGGTTA TGCAGTGCGG TAGACTTGTT CAGGTCTGCG
CCCGGACAGG CGCAGACGCT GTTGGCCAAC TGGGGGCAGG TTTTTAAGAC GTCGGCGGGT
TAA
 
Protein sequence
MMTVLLPPHL AEKLTPNERM VLQALLNGQD LTTIAQRRNR NIRTVSNHKQ RAMEKLGLNN 
NAMLYALAAL LSPPLPQASP QQMQSLSPRE HRVLAGLLQG KTVGAIAREQ HKSIKTISLQ
KQRLMEKLRL CSAVDLFRSA PGQAQTLLAN WGQVFKTSAG