| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2274 |
|---|
| Symbol | |
|---|
| ID | 5604900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2475334 |
|---|
| End bp | 2476263 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640937813 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001478503 |
|---|
| Protein GI | 157370514 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0887334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC TGTTGCAGTT ACTGCCGTTT TTCGAAGCCG TTGCCCGGCT GGGCAGCTTT
ACTCAGGCGG CCAGTCAGTT GGGCGTCACC CCACCCGCGG TGTCGCAAAA CATTCAGGCG
TTGGAAACCC GGCTTGGCGT ACGGCTGTTC AACCGCACCA GTCGGTCGGT GCGGCTAAGC
GATGAGGGCC ACCTTTTTTA CCAACGGGTG GCGCCGGCGA TGGGCCAAAT AGAGGGGGCC
GCAGACGACG TTCGCGCCCT GCACGGTCAC CCTTCCGGCC TGCTGCGCAT TACCCTGCCG
CAGTTGGCCG CCTCGCTGTT GGTGATGCCT CATCTGGCGG AGTTTCAGGC GCTTTACCCC
GAGGTGCAGC TTGAACTGTT TACCGACGAC CACTTTTCCG ATTTGGTGTT GGACAGTTTC
GATGCCGGTA TCCGTATGCA CGCCATGTTG CCAAAAGACA TGATTGCAGT GCCGATCGAC
AACGGCCAAC GGCGGATGAT TATCGCCACG CCCGGCTATC TGGCGCAGTA CGGTACACCA
CTGACGCCGC AGGCACTGTA CGAGCACAAC TGCCTGCGCT ACCGTTTCCC CGTCAGCGGT
AAGTTTGAGC CATGGTATTT CAGGCAGGAT GAAGAGCTAT TAATGCTGGA GTTCAGCGGC
AGCCAGATAT TTAATGAAGA TCGCCTGATT AAAGACGCCG CGTTGGCGGG ATTAGGCATT
ACCCAGCGCT TTAGCGGCAC GGTGCAACGC GAACTAAACA GTGGACAACT GGTGGAAATA
CTGGCCGATT ATGGCAGCGA CTTCCCCGGG TTTTTCATCT ACTTTCCGGC CAGTCGGCAT
ATGCCGCTCA AGCTGCGGGT ATTTGTTGAT TTTATGCGGG AAAAGCGGGC GCACCAGTCA
TCGTCTCAGG ACGCCATTAC AGCGTCCTGA
|
|---|
| Protein sequence | MSSLLQLLPF FEAVARLGSF TQAASQLGVT PPAVSQNIQA LETRLGVRLF NRTSRSVRLS
DEGHLFYQRV APAMGQIEGA ADDVRALHGH PSGLLRITLP QLAASLLVMP HLAEFQALYP
EVQLELFTDD HFSDLVLDSF DAGIRMHAML PKDMIAVPID NGQRRMIIAT PGYLAQYGTP
LTPQALYEHN CLRYRFPVSG KFEPWYFRQD EELLMLEFSG SQIFNEDRLI KDAALAGLGI
TQRFSGTVQR ELNSGQLVEI LADYGSDFPG FFIYFPASRH MPLKLRVFVD FMREKRAHQS
SSQDAITAS
|
|---|
| |