Gene Spro_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2228 
Symbol 
ID5605238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2427234 
End bp2427734 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content56% 
IMG OID640937767 
Productcupin 2 domain-containing protein 
Protein accessionYP_001478457 
Protein GI157370468 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000300974 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGAAC AAGCCACGCT GTTAGCTCAG CGTTTGATCC GTAATTTCGA ACAGGTTGAA 
AAAACGCACG ACGCACGCCC GCCACTGTAC GACAGCCTTG GTGCGCGTTT GGGTACCGGC
ACCGCCGCCG GTAAGCTGGG TGCCTCTATC GACGTAGTGG CACCGGGCAT GCGTTCCTGC
CCTTATCACT TCCACTATGC GCAGGAAGAA ATGTTTATCG TGCTGGAGGG AACCGGTACC
TTGCGGGTTG CCGGAGAACA ACTGCCGATC AAAAGCGGTG ACGTGATTTT TATCCCACCA
GGGCCGGAAT ATCCGCATCA GATCATCAAT ACGTCGCAAG CGCCGTTGAA ATACCTTTCC
ATCAGTACCC GCGAACAGCC TGAACTGGTG GAGTATCCGG ACTCAGGCAA GTTCCAGGCG
ACGGCGCTGC GTGAAGGTAA AGCGGTGCGC TATGTGCAAC GCCCCTCAGC CTCGCTCGAT
TACTGGCAGG ATGAACCCTG A
 
Protein sequence
MNEQATLLAQ RLIRNFEQVE KTHDARPPLY DSLGARLGTG TAAGKLGASI DVVAPGMRSC 
PYHFHYAQEE MFIVLEGTGT LRVAGEQLPI KSGDVIFIPP GPEYPHQIIN TSQAPLKYLS
ISTREQPELV EYPDSGKFQA TALREGKAVR YVQRPSASLD YWQDEP