Gene Spro_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2157 
Symbol 
ID5605903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2354252 
End bp2355157 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content57% 
IMG OID640937693 
Productpolysaccharide deacetylase 
Protein accessionYP_001478386 
Protein GI157370397 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TCGGTCTGCG AGTTGACGTA GATACCTTCA GCGGCACCCG GGAAGGGGTG 
CCGCAGTTGC TGGAGCTGTT CGACAAGTAC AATATTCAGG CCAGTTTCTT CTTCAGCGTT
GGACCGGACA ATATGGGGCG CCATTTGTGG CGCCTTTTGC GTCCGAAATT CCTGTGGAAA
ATGCTGCGCT CCAATGCCGC GTCACTGTAC GGCTGGGATA TTTTGCTGGC AGGCACGGCC
TGGCCGGGGC GTAATATTGC CCGTGCCCTG GGGCCGTTGA TGAAACTGAC TGCCCAGGCT
GGGCATGAAG TGGGGCTGCA CGCCTGGGAT CACCAGGGTT GGCAGGCCAA GGTTGGCCGT
TGGTCAGAAG CGCAACTGAT GCAGCAGGTT CAGCTCGGTG TGGATGCGCT GGCCAACAGT
ACCGGTCAGC CTGTCAAATG TTCGGCGGTT GCCGGTTGGC GTGCCGATAC GCGGGTGCTG
GAAGTGAAGC AGCGTTTTGG TTTTCACTAC AACAGCGACT GTCGTGGCAC CCATCCCTTC
CGTCCGGTGT TAAGCGATGG CCGCCTGGGA ACCGTACAAA TCCCTGTCAC GCTGCCTACC
TTTGATGAGG TGATTGGCAG TGAAGTGAGT ATGAATGATT TCAACGATTA CATTCTGCGG
GAGATTGAAA ACGATCGCGG TGTGCCGGTG TATACCATTC ATACCGAAGT GGAGGGCATG
TCACAGGCCG CAATGTTTGA GCAGTTATTG CTGCGGGCGC AACGGCAGGG CATAGAATTC
TGTCCGTTAA GCGCACTGTT GCCTCAAGAT TTGGCGTCAT TGCCATTGGG CCGCGTCGAG
CGCGCTCCTT TCCCTGGCCG CGAAGGTTGG CTGGGTTGTC AAACCGATGT GAAGGACGAT
TCATGA
 
Protein sequence
MKKVGLRVDV DTFSGTREGV PQLLELFDKY NIQASFFFSV GPDNMGRHLW RLLRPKFLWK 
MLRSNAASLY GWDILLAGTA WPGRNIARAL GPLMKLTAQA GHEVGLHAWD HQGWQAKVGR
WSEAQLMQQV QLGVDALANS TGQPVKCSAV AGWRADTRVL EVKQRFGFHY NSDCRGTHPF
RPVLSDGRLG TVQIPVTLPT FDEVIGSEVS MNDFNDYILR EIENDRGVPV YTIHTEVEGM
SQAAMFEQLL LRAQRQGIEF CPLSALLPQD LASLPLGRVE RAPFPGREGW LGCQTDVKDD
S