Gene Spro_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2137 
Symbol 
ID5606029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2331597 
End bp2333378 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content58% 
IMG OID640937673 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001478366 
Protein GI157370377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.610724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGG TAATGAAAAA AGTAGACGCG GTGATCGTCG GCTTCGGCTG GGTGGGCGCC 
ATTATGGCCA AAGAATTGAC CGAGGCCGGG CTGAACGTGG TGGCGCTGGA ACGCGGCCCG
ATGCGCGATA CCTATCCGGA TGGTTCCTAC CCGCAGGTGA TCGACGAACT GACCTATAAC
ATTCGCCGCA AACTGTTCCA GGATTTGTCA AAAAGCACCG TGACCATTCG TCATAATACC
AGCCAGACGG CGGTGCCTTA CCGTCAGTTG GCGGCGTTCT TGCCGGGTAC CGGCGTGGGT
GGCGCAGGCC TGCACTGGTC TGGCGTGCAT TTCCGGGTCG ATCCGATTGA ATTGCGCATG
CGCAGTCACT ACGAAGAACG TTACGGCAAG AGTTTTATCC CGAAAGACAT GACCATTCAG
GATTTCGGTG TCAGCTACGC CGAGCTGGAG CCGTTCTTCG ACAAAGCGGA AAAAGTGTTC
GGCACTTCCG GCACCGCCTG GACCATCAAA GGCCAGAAAG TGGGCCAAAA GGGCGGTAAC
CCGTTTGCCG GTGACCGTTC CGATGACTTC CCGTTGCCGG CGCAGAAAAA TACTTTCTCC
GCCCAGATGT TCGAGAAAGC CGCGCGAGAC GTGGGATACC ATCCTTATAA CCTGCCTTCT
GCCAACACCT CGGATTCCTA TACCAACCCG TATGGCGCGC AGATGGGGCC GTGCAACTTC
TGCGGTTTCT GTAGCGGTTA CGCCTGCTAT ATGTATTCCA AAGCCTCGCC GAACGTCAAT
ATTCTGCCGG CACTGCGCAT GGAGAAACGC TTCGAGCTGC GCACCAACGC CAACGTGTTG
AAAGTGAACC TGACCGCCGA CAAGTCTCGT GCGACCGGTG TGAATTACAT TGATGCGCAG
GGCCGTGAAG TTGAGCAACC GGCCGAACTG GTGATCCTGG GCGCGTTCCA GTTCCACAAC
GTCCACCTGA TGCTGCTGTC CGGCATCGGC AAACCTTACG ATCCGGTGAC CGGCGAAGGG
GTGGTTGGGC GTAACTTCGC CTATCAGAAC ATGACCACCA TCAAGGCGTT CTTCGACAAG
GACGTGTTCA CTAACCCGTT CATCGGCGCC GGCGGTAACG GTGTGGGTGT GGACGACTTC
AACGCCGACA ACTTTGACCA TGCCGAGGCA GGCTTTGTTG GCGGTTCGCC GTTCTGGGTC
AACCAGGCGG GCACCAAACC GATCTCCGGC TTGCCAACCC CTCCGGGTAC CCCGGCCTGG
GGCAGTAAGT GGAAAGCGGC GGTGGCAGAT GCCTATACCC ATCATGTCTC GATGGATGCC
CACGGCGCGC ACCAGTCTTA TCGCAGCAAC TATCTGGATC TCGATCCTAC CTATAAGAAC
GTGTTCGGCC AGCCGCTGCT GCGCATGACG TTCGACTGGC AGGAAAACGA CGTCAAGATG
TCGCAATTTA TGTACGAGAA AATGGCGCCG ATCGCCAAGG CCATGAACCC GAAACTGATC
TCCGGCAGCC CAAAAAATGC CGACAGCCAT TTCGATACCA CCAGCTACCA AACCACCCAT
ATGAACGGCG GTGCGGTGAT GGGCGAAGAT CCGAACACCA GCGCGGTGAA CCGCTATCTG
CAGAGCTGGG ACGTGCATAA CGTGTTCTCG ATCGGCGCGT CGGCCTTCCC GCAGGGGCTG
GGTTACAACC CGACCGGCAC CGTGGCCGCG TTGGCTTACT GGTCTGCACG CGCTATTCGC
GAGCAGTATC TGAAAAACCC AGGCCCTTTG GTGCAGGCAT AA
 
Protein sequence
MATVMKKVDA VIVGFGWVGA IMAKELTEAG LNVVALERGP MRDTYPDGSY PQVIDELTYN 
IRRKLFQDLS KSTVTIRHNT SQTAVPYRQL AAFLPGTGVG GAGLHWSGVH FRVDPIELRM
RSHYEERYGK SFIPKDMTIQ DFGVSYAELE PFFDKAEKVF GTSGTAWTIK GQKVGQKGGN
PFAGDRSDDF PLPAQKNTFS AQMFEKAARD VGYHPYNLPS ANTSDSYTNP YGAQMGPCNF
CGFCSGYACY MYSKASPNVN ILPALRMEKR FELRTNANVL KVNLTADKSR ATGVNYIDAQ
GREVEQPAEL VILGAFQFHN VHLMLLSGIG KPYDPVTGEG VVGRNFAYQN MTTIKAFFDK
DVFTNPFIGA GGNGVGVDDF NADNFDHAEA GFVGGSPFWV NQAGTKPISG LPTPPGTPAW
GSKWKAAVAD AYTHHVSMDA HGAHQSYRSN YLDLDPTYKN VFGQPLLRMT FDWQENDVKM
SQFMYEKMAP IAKAMNPKLI SGSPKNADSH FDTTSYQTTH MNGGAVMGED PNTSAVNRYL
QSWDVHNVFS IGASAFPQGL GYNPTGTVAA LAYWSARAIR EQYLKNPGPL VQA