| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1994 |
|---|
| Symbol | |
|---|
| ID | 5603500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2181557 |
|---|
| End bp | 2182411 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640937532 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001478225 |
|---|
| Protein GI | 157370236 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.794315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00450232 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA AAGTGGTTAG CATTGGTGAC ATCAACGTAG CGAACGATCT GCCGTTTGTG
CTGTTTGGCG GTATGAACGT GCTGGAATCA CGCGATCTGG CGATGCGCAT TTGCGAACAC
TACGTCACCG TGACGCAAAA ACTGGGCATC CCTTACGTTT TTAAAGCTTC TTTTGATAAA
GCCAACCGTT CTTCCATCCA CTCTTACCGT GGTCCAGGCC TGGAAGAAGG GATGAAGATC
TTTGAAGAAA TCAAAAAGAC CTTCGGCGTG AAAACCATCA CCGACGTGCA TGAAGCTTCA
CAGGCGCAGC CGGTGTCCGA AGTGGTTGAC GTGATCCAGC TGCCGGCATT CCTGGCACGC
CAAACCGATC TGGTAGAAGC GATGGCGAAA ACCGGTGCGG TGATCAACGT CAAGAAACCT
CAGTTCGTCA GCCCGGGCCA AATGGGCAAT ATCGTCGACA AGTTCAAGGA AGGCGGTAAC
GATCAGGTGA TCTTGTGCGA TCGCGGCAGC AACTTTGGTT ACGATAATCT GGTGGTCGAC
ATGCTGGGTA TCAACGTGAT GAAAAATGCC ACTGGCGGTC ATCCGGTGAT CTTCGACGTG
ACCCACGCCC TGCAGACCCG TGATCCGTTT GGCGCCGCAT CCGGCGGTCG TCGTGCGCAG
GTTGCCGAAC TGGCGCGTGC CGGTATGGCG GTTGGCCTGG CTGGGCTGTT TATTGAAGCG
CACCCAGAGC CGAACAGCGC CAAGTGTGAT GGCCCGTCCG CGTTGCCGCT GGACAAGCTG
GAGCCGTTCC TGGTGCAGAT GAAAGCCATC GACGATCTGG TGAAGAGCTT CCCAGAGCTC
GATACCAGCA ACTAA
|
|---|
| Protein sequence | MKQKVVSIGD INVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK
ANRSSIHSYR GPGLEEGMKI FEEIKKTFGV KTITDVHEAS QAQPVSEVVD VIQLPAFLAR
QTDLVEAMAK TGAVINVKKP QFVSPGQMGN IVDKFKEGGN DQVILCDRGS NFGYDNLVVD
MLGINVMKNA TGGHPVIFDV THALQTRDPF GAASGGRRAQ VAELARAGMA VGLAGLFIEA
HPEPNSAKCD GPSALPLDKL EPFLVQMKAI DDLVKSFPEL DTSN
|
|---|
| |