Gene Spro_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1963 
Symbol 
ID5607308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2145185 
End bp2146213 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content58% 
IMG OID640937501 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001478194 
Protein GI157370205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0528272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG TAAAAATCGA GAAGCCGCTT GCGGGTAAAG CGCCGCTGTT CGCTGGCCTG 
AGTGGCAAAA TGCCGAAAGA CACCGGCATC TTTATCGTGA TGATCGGCAT CGCGTTGGTG
TTTGAAATTC TTGGCTGGTA CATCCGCGAC CAGTCCTTCC TGATGAACCC TAACCGCCTG
CTGCTGATTG TGCTGCAGGT GGCGATTATC GGCATCATCG CGGTGGGGGT GACCCAGGTC
ATCATCACCA CCGGCATCGA TCTTTCCTCC GGCTCGCTGA TAGCCCTGAC GGCTGTGGTG
GCGGCCAGCC TGGCGCAAAC CTCGGACAGT ATTTCACCGA TGTACCCGGC GTTGCTCGAC
CTGCCGGCGG CGATCCCGAT CGGCGCGGGG ATCGGGGTGG GCATTATCTG CGGTTTCATC
AACGGCTTCC TGATTACCCG CACCGGCATC CCACCGTTTA TCGCAACTCT GGGCATGATG
GTTTCGGCGC GTGGCCTGGC GCAGTATTAC ACCCAGGGTA ACCCGGTCAG CTTCCTGTCC
GACGGCTTTA CCTCTATCGG CCAGGGCGCG ATGCCGGTGA TCATCTTCCT GGTGATTGCG
GTGATCTTCC ACATTGCGTT GAAACACACC CGTTACGGTA AGTACATCTA CGCCATCGGC
GGCAACATGA CGTCGGCCAG AGTCTCCGGC ATCAACGTCA ATAAATACCT GGTGACGGTC
TATACCATCG CCGGTGGCCT GGCAGGGCTG GCAGGTGTGG TATTGGCGGC GCGCGTCAGC
AGCGGCCAGT CGAGCATGGG GATGTCTTAC GAGCTGGATG CCATCGCCGC GGCGGTGATC
GGCGGCAGCA GCCTGATGGG CGGCGTTGGG CGCATTACCG GCACATTGAT TGGCGCGGTG
ATCCTCGGGC TGATTAAAAG CGGCTTCACC TTTATCGGCG TAGACTCCTA TATTCAGGAC
ATTATCAAAG GCGTGATTAT CGTCGCCGCC GTGTCTATCG ACATGCGCCG TAACCGTAAA
AAACACTGA
 
Protein sequence
MSNVKIEKPL AGKAPLFAGL SGKMPKDTGI FIVMIGIALV FEILGWYIRD QSFLMNPNRL 
LLIVLQVAII GIIAVGVTQV IITTGIDLSS GSLIALTAVV AASLAQTSDS ISPMYPALLD
LPAAIPIGAG IGVGIICGFI NGFLITRTGI PPFIATLGMM VSARGLAQYY TQGNPVSFLS
DGFTSIGQGA MPVIIFLVIA VIFHIALKHT RYGKYIYAIG GNMTSARVSG INVNKYLVTV
YTIAGGLAGL AGVVLAARVS SGQSSMGMSY ELDAIAAAVI GGSSLMGGVG RITGTLIGAV
ILGLIKSGFT FIGVDSYIQD IIKGVIIVAA VSIDMRRNRK KH