| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1928 |
|---|
| Symbol | |
|---|
| ID | 5606677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2109912 |
|---|
| End bp | 2110397 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937464 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001478159 |
|---|
| Protein GI | 157370170 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.439593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00175211 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATT TTCGCTTTCC GACTGCAATG CAAATGGTAC TTAGCGTGGC CGTGGCTGAG
AAGCTGGGCG TGCGTTCGAC CAGCGCGGTG CTTGCCGCCG GTCTGGAAGC CAACCCCAGT
TTTATCCGCA AGCTGATGGT GCCCTTGACC AAAAATGGCA TCATCGTTTC GACCCTGGGC
CGTAACGGCT CGATTCACCT GGGCCGCCCG GCGGAGCAGA TCACCCTGCG AGATATCTAT
CTTTCCGTTA TCGAAGATAA ACGCATTTGG GCCGCCCGAC CGGAAGGGCC GGCGCGTTGT
CTGGTCAGTG CCAACGCCTG TTGGTATTTC AAGTCGGTGG TGAACGAAGC GGAAGAGGCA
TCGCTGAACG TGCTGGCGGG CTACACGGTG GCGGATTCCC TGGCCGAGCT GGAGCGGGGC
GATAAACGTG CCTGCGCGGC ATATGCAATG CAAGACGTGA AAGACGAAGA GACAGCAGAA
AAATAG
|
|---|
| Protein sequence | MLDFRFPTAM QMVLSVAVAE KLGVRSTSAV LAAGLEANPS FIRKLMVPLT KNGIIVSTLG
RNGSIHLGRP AEQITLRDIY LSVIEDKRIW AARPEGPARC LVSANACWYF KSVVNEAEEA
SLNVLAGYTV ADSLAELERG DKRACAAYAM QDVKDEETAE K
|
|---|
| |