Gene Spro_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1757 
Symbol 
ID5604922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1936043 
End bp1938178 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content54% 
IMG OID640937289 
Producthypothetical protein 
Protein accessionYP_001477989 
Protein GI157370000 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID[TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00297692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000536927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCTCTT TTGCACCAGC AATACGCCGT TATGCCTACA ACAGCAATCT GCTTTATGAT 
CTGCGCATCT TCATTGCACT GGCTGGTGCG GCCGCCGTAC CCTGGTGGTT AGCCATTCCC
AAGCTCACCA TTCCCCTGAC TCTGGGGGTG GTGGCAGCGG CGTTGACCGA TCTGGATGAT
CGCCTGGCTG GCAGGCTACG CAATCTGTTG ATCACACTGG TGTGTTTTTT TGTTGCTTCC
GCCTCCATTG AGCTGCTGTT TCCTTATCCG TGGCTGTTCG CTCTTGGCCT CACCGCCTCC
ACCTGCGGTT TTATTTTGCT GGGTGCCCTG GGGCAACGTT ACGCCACCAT TGCATTTGGT
GCCTTGCTGA TCGCGGTCTA TACCATGCTC GGCACCTCAA TGTATGACGC CTGGTATCAA
CAGCCGACGC TGCTGATCCT TGGTGCCCTG TGGTACAACC TGCTGACGCT GATTGGCCAC
CTGATCTTTC CTATCCGACC TCTGCAGGAA AATCTGGCGC GTTGTTACAA TCAATTGGCA
AGTTATCTGG ATGCCAAAGC CAACCTGTTT GACCCCGACG TCGAGCATGA TGCAGACCTG
CCGTGGATGG ACGTTGCCAT GGCCAATAGC GCTCTGGTGA CCATTCTTAA CCAGACCAAA
GTTTCATTGC TGACGCGGCT AAAAGGCGAT CGGGGTCAAC GCGGTACCCG CCGCACGCTG
CATTATTATT TCGTCGCCCA GGATATCCAT GAGCGCGCCA GTTCCTCCCA CGTTCAATAT
CAGGCACTGA GTCGACAGTT TCGTCACAGT GATATTCTGT TTCGTTTCCA ACGCTTGCTC
AGCATGCAGG CTCGCGCCTG TCAGCAGTTG GCGCAGTCGA TTTTGCTGCG GCAAAAGTAT
CAGCACAATC TTCGTTTCGA ACCGGTCTTT GGCCGTATTG AAGAAGCATT GACTCGCATT
GCCATCACCC CGGAAAACCG TGAGCTGACC AAAGCACTAT CGCACCTGTT GAAAAATTTG
CGCGCGATTG ACGCCCAACT GGCAAATATT GAGTCCGAGC AGGCACTGGC CAGCGGCCTG
GCGGAAGAGA ATAGTCTGTC GGATGACCGG CTCACCGGCT GGAGCGATAT CCGCCTGCGT
ATCAGCCGCC ATCTGACACC TCAGTCTGCC TTGTTCCGTC ATGCCATCCG TATGTCAGTG
GTACTGTGCG TGGGCTACGC CTTTATTCAG TTTACCGGCA TGCAGCACGG TTATTGGATC
CTGTTAACCA GCCTGTTTGT CTGCCAACCC AATTATAATG CCACGCGTCG CAGGCTGGCG
CTTCGAATCA TCGGCACGCT GGCCGGCATT CTTGTTGGCC TACCGATCCT CTATTTTGTG
CCCTCTCTGG AAGGCCAGAT GGTGCTGATC GTCATCAGCG GCGTTCTGTT CTTCGCCTTT
CGAACCGTGC AATACGCACA TGCCACCATG TTTATCACCC TGCTGGTATT GCTGTGCTTT
AACTTGCTGG GTGAGGGTTT TGAAGTGGCC GCGCCTAGGG TTTATGACAC GATTCTGGGA
TGTGCCATCG CCTGGGCGGC AGTCAGTTTT ATCTGGCCAG ACTGGAAATT CCGCCAATTA
CCGGCAGTTG TCAGTAAAAC GCTGAATGCC AACTGCCGTT ATCTGGATGC CATTCTGGTG
CAATATCATC AGGGTAAAGA CAACGGCCTT CCTTATCGTA TCGCTCGCCG GGATGCACAC
AACAGTGATG CGGAGCTGGC TTCGGTGATA TCAAATATGT CTGCCGATCC AAAAGCAAAT
AAAGAAGTTC AGGAAGCCGC CTTCCGCCTG TTGTGTTTAA ACCACACCTT ATTAAGTTAT
ATCTCTGCGT TGGGTGCACA TCGTGAGCGT CTGAATAACC CCGCTACGCT GGACCTGTTA
AATGATGCAG TTTGTTATGT CGATGGTGCC CTGCACCAGG AAGAACTCGA CGACCGGCGC
ATCACTCAGG CGTTGGAAAG CCTGGCTGAA CGAATTGTGC ACGCTGCGCC GGAGCCGGAA
AGCAAAGATC AATTGGTGTT GCAGCAAATT GGGCTGGTCA TCGAGTTGCT GCCGGAGCTT
ACTATGCTGA ATGCGCAAAT CGGCAAATCG GCTTGA
 
Protein sequence
MLSFAPAIRR YAYNSNLLYD LRIFIALAGA AAVPWWLAIP KLTIPLTLGV VAAALTDLDD 
RLAGRLRNLL ITLVCFFVAS ASIELLFPYP WLFALGLTAS TCGFILLGAL GQRYATIAFG
ALLIAVYTML GTSMYDAWYQ QPTLLILGAL WYNLLTLIGH LIFPIRPLQE NLARCYNQLA
SYLDAKANLF DPDVEHDADL PWMDVAMANS ALVTILNQTK VSLLTRLKGD RGQRGTRRTL
HYYFVAQDIH ERASSSHVQY QALSRQFRHS DILFRFQRLL SMQARACQQL AQSILLRQKY
QHNLRFEPVF GRIEEALTRI AITPENRELT KALSHLLKNL RAIDAQLANI ESEQALASGL
AEENSLSDDR LTGWSDIRLR ISRHLTPQSA LFRHAIRMSV VLCVGYAFIQ FTGMQHGYWI
LLTSLFVCQP NYNATRRRLA LRIIGTLAGI LVGLPILYFV PSLEGQMVLI VISGVLFFAF
RTVQYAHATM FITLLVLLCF NLLGEGFEVA APRVYDTILG CAIAWAAVSF IWPDWKFRQL
PAVVSKTLNA NCRYLDAILV QYHQGKDNGL PYRIARRDAH NSDAELASVI SNMSADPKAN
KEVQEAAFRL LCLNHTLLSY ISALGAHRER LNNPATLDLL NDAVCYVDGA LHQEELDDRR
ITQALESLAE RIVHAAPEPE SKDQLVLQQI GLVIELLPEL TMLNAQIGKS A