Gene Spro_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1729 
Symbol 
ID5604509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1901807 
End bp1903012 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content55% 
IMG OID640937261 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001477961 
Protein GI157369972 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0015695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAC CTGACATGTT TGAAAAAATC ACTGCTGCAC CTGCCGATCC GATCCTGGGT 
CTGACCGACA TTTTCCGCGC TGACGCTCGT CCTAACAAAA TCAACCTGGG GATTGGCGTT
TATAAAGATG AAACCGGTAA AACTCCGGTG CTGACCAGCG TTAAAAAAGC TGAGCAGTAT
CTGCTGGAAA ATGAGACCAC CAAAAACTAT CTCGGCATTG AAGGTATTCC GGCGTTCGCC
AACTGTACGC AAGAGCTGCT GTTCGGCAAA CAAAGCCCAA TTATTGCCGA CAAGCGTGCG
CGCACTGCAC AAACTCCTGG TGGCACCGGC GGCCTGCGTG TTGCAGCTGA CTTCATCGCC
AACCAGACCA GCGCGAAACG CATCTGGATC AGCAACCCAA GCTGGCCGAA CCACAACAAC
GTGTTTGGTG CAGTCGGTCT GGAAGTGTTG GAATACGCTT ACTACGACGC CGCCAATCAT
GCGCTGGACT TCGATGGTCT GCTCCGCAGC CTGCAACAGG CTCAGGCCGG CGATGTGGTG
CTGTTCCACG GTTGCTGCCA TAACCCAACC GGCATCGACC CAACGGCTGA GCAGTGGGCA
CAATTGGCCG AGCTGTCTGT GGCTAACGGT TGGTTGCCAC TGTTTGACTT CGCATACCAG
GGCTTTGCGA AAGGATTGGA AGAAGATGCT CAGGGCCTGC GTATTTTTGC CGCCAAGCAT
CAGGAACTGA TCGTCGCCAG TTCTTACTCG AAGAACTTCG GTCTTTACAA CGAACGCGTG
GGTGCCTGTA CCGTCGTTGC TGCTGATGCA GAAACCGCCG ATCGTGCCTT CAGCCAGGTG
AAAGCGGCTA TCCGCGCCAA CTACTCCAAC CCGCCGTCAC ACGGTGCTGC CATTGTGGCA
ACCATCTTGG GCGACGATGC GTTGCGTGCG CTGTGGGAGC AGGAACTGAC TGACATGCGT
CAACGTATTC ACCGCATGCG TCAGCTGTTT GTGAATACCC TGCAGGAGAA AGGCGCTGAG
CAGGACTTCA GCTTTATCAT CAATCAGAAC GGCATGTTCT CATTCAGCGG GCTGACCAAA
GAACAGGTTC TGCGTTTGCG TGAGGAATTT GGCGTCTACG CCGTTAACTC CGGCCGCGTT
AACGTTGCCG GCATGACACC AGACAATATG GCGCCGCTGT GCGAAGCCAT CGTCGCCGTG
CTGTAA
 
Protein sequence
MEAPDMFEKI TAAPADPILG LTDIFRADAR PNKINLGIGV YKDETGKTPV LTSVKKAEQY 
LLENETTKNY LGIEGIPAFA NCTQELLFGK QSPIIADKRA RTAQTPGGTG GLRVAADFIA
NQTSAKRIWI SNPSWPNHNN VFGAVGLEVL EYAYYDAANH ALDFDGLLRS LQQAQAGDVV
LFHGCCHNPT GIDPTAEQWA QLAELSVANG WLPLFDFAYQ GFAKGLEEDA QGLRIFAAKH
QELIVASSYS KNFGLYNERV GACTVVAADA ETADRAFSQV KAAIRANYSN PPSHGAAIVA
TILGDDALRA LWEQELTDMR QRIHRMRQLF VNTLQEKGAE QDFSFIINQN GMFSFSGLTK
EQVLRLREEF GVYAVNSGRV NVAGMTPDNM APLCEAIVAV L