Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1680 |
Symbol | |
ID | 5604199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1838615 |
End bp | 1839496 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937212 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001477912 |
Protein GI | 157369923 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.21592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.237518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAATC TTCTCCATTG GCGTTTATTG GTTGCGGTAG CCGACAGCGG TAAAATCACC CAGGCGGCAA GCCAATGCGG CATGACCCAA TCCGCCGCCA GTCAGGCCAT CGCTCAGTTG GAAGATGCGC TGAATACCTT GCTGTTGGTT CGCCTGCCGC ACAGCGTTGC GCTTACCCAG AGTGGTGAAC AAATTGTCGT TCACGCCCGC GCCATGCTGG CCGAGCTGGA GGCAATCCAA CACTACGCGC AGCGGGCACA AAGCGCGCAC GCCGGAAAGA TTCGCCTGGC CAGTTTCCCC TCCGCATTCT CCCTGTTACT GCCGCCGTTA TTACGTAAAT TCCGCCGTCG CTATCCTGCG ATTGAACTGG TTCAATTGGA AGGTACCGAC CAGGAAGTAG AAAACTGGTT GGCACTGGAA ACCGCCGACG TCGGTGTGGT GTTGAACCCA AATAGAGAAC GGCAAAGCTA CCCATTGGGG CAAGACCTGT GGCTGGCCGT GACCGCCAGT CATCATCCAC TGGCCAGGGG GCGGCAACCG GTGGAGTTCA GCACACTGGC CAAACAGCCG TTTGTGCTGG CTACCGGCGG CTGCAATCTC AATGCGCAAC TGTTGGCACA GCAGGCCGGG TTGGTATTAA CCGATGTACG TATCACCGTC AGTGACTGGA ACACCGCCCT GACGCTGGTT CGGGAAGACG CCGGTGTATC GTTGATTCTA GCCTCGGTGA TACCGACCGA TCTCTCAGGT ATTTGCGCGT TGCCTTTGGC TACGCCGCTT TATCGTCATT TTGGCCTGGT CTGTTCGTTT GGCAGCGCGG CTTCAGCGCC GGTACAGACC CTGCTGCAAT ATCTACAGCA GCACCTGCCC GTCAGTAGCT GA
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Protein sequence | MHNLLHWRLL VAVADSGKIT QAASQCGMTQ SAASQAIAQL EDALNTLLLV RLPHSVALTQ SGEQIVVHAR AMLAELEAIQ HYAQRAQSAH AGKIRLASFP SAFSLLLPPL LRKFRRRYPA IELVQLEGTD QEVENWLALE TADVGVVLNP NRERQSYPLG QDLWLAVTAS HHPLARGRQP VEFSTLAKQP FVLATGGCNL NAQLLAQQAG LVLTDVRITV SDWNTALTLV REDAGVSLIL ASVIPTDLSG ICALPLATPL YRHFGLVCSF GSAASAPVQT LLQYLQQHLP VSS
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