Gene Spro_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1601 
Symbol 
ID5603750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1754195 
End bp1755208 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content49% 
IMG OID640937133 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_001477833 
Protein GI157369844 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000383307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0692735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATTT TAGTCACTGG CGGTGCCGGT TATATCGGTT CTCACACAGT TCTGACCCTG 
CTGGAACGTG GTGAAAAGGT CATTGTGTTA GATAACCTGT CGAACTCATC AGAAGAGTCT
TTGCGTCGTG TAGAAAAGTT AACGGGCAAA GCTGCCGTGT TTTACCAAGG GGATATCCAA
AATGCTGAAT GTTTGCGTCG CATCTTTGAT GACCACGAAA TTTCAGCAGT GATCCATTTT
GCCGGCCTGA AAGCAGTAGG TGAGTCGACT CGCAAGCCAC TTGAGTACTA TCAAAACAAT
GTTGCCGGTA CGCTGGTGTT ACTGGATGAA ATGCGTCGTG CAGGTGTTCA CCAATTTATC
TTTAGCTCTT CCGCTACGGT TTATGGCGCT AACTCACCGG TTCCTTATGT GGAAACTACG
CCGATTGGCG GGACTACCAG CCCATATGGG ACCTCCAAAT TGATGGTAGA GCAGGTTTTG
CAGGATTTTG CCAAGGCTGA GCCCCAGTTT TCCATTATTG CCCTGCGTTA CTTCAATCCG
GTCGGTGCGC ATGAGTCAGG TTTGATTGGT GAAGATCCAA ATGGTATCCC AAACAATCTG
TTGCCCTATA TCTCTCAGGT AGCAATTGGC AAACTGGATA AGTTGGGCAT TTTCGGTGGT
GATTACCCAA CTGAAGATGG CACCGGTGAA CGTGATTACA TCCACGTGAT GGATTTGGCC
GAAGGGCATC TGATGGCGAT GGATCATCTG AATAAAGTCG GAGGCTTCAA AGCATACAAT
CTGGGAGCAG GGGCAGGGCA CTCGGTCTTG GCAATGGTGC AGGCTTTTGA AAAAGCATCT
GGAGTGAAGA TCCCATATCA GATCTTACCG CGTCGTGACG GAGATCTGCC GGCCTTCTGG
GCTGACGCGA ATCTTGCCCG TGAGGAGCTG GGTTGGGAAG TGCGGCGCGG TATCGATGAA
ATGATGCGCG ATACCTGGAA TTGGCAAAAG AATAACCCGA AAGGTTATCG GTAG
 
Protein sequence
MVILVTGGAG YIGSHTVLTL LERGEKVIVL DNLSNSSEES LRRVEKLTGK AAVFYQGDIQ 
NAECLRRIFD DHEISAVIHF AGLKAVGEST RKPLEYYQNN VAGTLVLLDE MRRAGVHQFI
FSSSATVYGA NSPVPYVETT PIGGTTSPYG TSKLMVEQVL QDFAKAEPQF SIIALRYFNP
VGAHESGLIG EDPNGIPNNL LPYISQVAIG KLDKLGIFGG DYPTEDGTGE RDYIHVMDLA
EGHLMAMDHL NKVGGFKAYN LGAGAGHSVL AMVQAFEKAS GVKIPYQILP RRDGDLPAFW
ADANLAREEL GWEVRRGIDE MMRDTWNWQK NNPKGYR