Gene Spro_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1590 
Symbol 
ID5603542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1736456 
End bp1737613 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content34% 
IMG OID640937122 
Productglycosyl transferase group 1 
Protein accessionYP_001477822 
Protein GI157369833 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.591641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0531102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA TGGCAACGCA GGCTACCAAG GACGCAAAGT TTCACGGGGG AGGTGAATAT 
GCTAAGGAGA TTTTTTTTAG AGCTATAAGC AATGGATTTG TAGATTTCCA ATGTGTTTAC
AATAGCAATT ACGAACTCGA AGATAACATT CTCAAAGCTT GCAATGAAAA CAACATATAT
TTACATGCTG TGGAAAGTGT TGAACAACTC TGTAAGTATA TAAAAGATCT CAAACCGAAA
ATATTTTATT CGGCAATGCC CTATGAATTG TATAATCTTC CAACTGAAGA TACTCATTTT
ATTATGACTG TCCATGGGTT AAGGGAGATC GAGTGCCCAT ATGACGATGT TCAATGGAAG
TATACTTTTG GTTTAATTCA AAAGTTCAAA CTATTAATAA AACGGACTAT TTTTAAGAAC
CATACACAAA AAAAATACCT ATCGTTATTT GAAAGGCTGC TAACCAAAAA AAATATATCT
ATAGTTACGG TTTCGGAACA TACAAAATAT TCGATTCTTT CGAACTTCAG CCATTTGAAA
CCTGAATGTG TGCATGTATA TCCTGCTCCT TGTCCGTTCG GGGATGAAGA ACCTGAGTTA
TCATCGGAAC TTAAAACATT ATCTCTAAAA AATAACGGTT TCTTTTTGTT AGTGAGCGCG
AATAGATGGA TGAAGAATAA CCATCGAGCA TTGATGGCCT TGTCTAATTT TTATAAAAAA
AATCGCGAGT GCGGTATAAA AACAGTAGTA ACAGGCCTCA AGAAACCACC TTCGTTTTTA
GAGGGGAATT CAAATTTTAT TTTTATGGAT TACATTGATA CATCATCGCT TAATTGGCTC
TATAAGAATG CATACAGTTT CATATATCCA TCTCTTAACG AAGGGTATGG ATATCCGCCA
CTGCAAGCAA TGCGTTATGG CACCCCGGTT CTAGCTTCTT CTGTATCAAG TATTCCAGAA
GTTTGCAAAG ATAATGTACT TTATTTTGAT CCGAAAAATG TAATGGAAAT AGAAAACAGA
ATTTTTAGAA TTTATTTAGA TAGCGAGTGT CACAATTCTT TAAGTTTGAA AGGAATTAAA
CATTCTTTAT ATGTAAAAGA TTATCAGGAA ATTGAGATGA AATCCTTAAT TGAAGTGATA
TTTAATTATC GAATGTAA
 
Protein sequence
MDLMATQATK DAKFHGGGEY AKEIFFRAIS NGFVDFQCVY NSNYELEDNI LKACNENNIY 
LHAVESVEQL CKYIKDLKPK IFYSAMPYEL YNLPTEDTHF IMTVHGLREI ECPYDDVQWK
YTFGLIQKFK LLIKRTIFKN HTQKKYLSLF ERLLTKKNIS IVTVSEHTKY SILSNFSHLK
PECVHVYPAP CPFGDEEPEL SSELKTLSLK NNGFFLLVSA NRWMKNNHRA LMALSNFYKK
NRECGIKTVV TGLKKPPSFL EGNSNFIFMD YIDTSSLNWL YKNAYSFIYP SLNEGYGYPP
LQAMRYGTPV LASSVSSIPE VCKDNVLYFD PKNVMEIENR IFRIYLDSEC HNSLSLKGIK
HSLYVKDYQE IEMKSLIEVI FNYRM