Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1551 |
Symbol | |
ID | 5602585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1690775 |
End bp | 1692313 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640937083 |
Product | extracellular solute-binding protein |
Protein accession | YP_001477783 |
Protein GI | 157369794 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA CATTCAAACG TAAGGCATTG GCGGCCGTCG TGCTGTTGGC GGCAGTGGGC GCAGGCCCGG CCTGGGCGGC GAAAGATGCG GTGATCGCCG TCGCATCCAA CTTCACCACG CTTGACCCCT ATGATGCCAA CGACACGCTG TCGCAGGCCG TGGCCAAATC TTTCTATCAG GGCCTGTTCG GTTTCGACAA GGACATGAAG CTGGTGAACG TGCTGGCGGA CAGCTATGAG GTGAGTCCGG ATGGCCTGAC TTACACCGTC AAACTGCATC CGGGGGTGAA ATTCCATGAC GGTACCGAGT TTAACGCCGA AGCGGTGAAG GTGAACCTGG ATCGCGCCAG CAACCCGGAC AACCACCTCA AACGTTACAA CCTGTTCAAA ATGATCGATA AAACCGAGGT GGTAGATGCC ACTACGGTGA AAATCGTGCT GAAAGCGCCA TTCTCGGCGT TTATCAACAA CCTGGCACAC CCGGCGGCGG TGATCATTTC CCCGGCGGCG CTAAAGCAGT ACGGCAAAGA GATTGGTTTC CACCCGGTGG GCACCGGCCC TTATCAGTTT GTGACCTGGA ACCAGACCGA TTTCGTTAAG GTGAAGAAGT TTGACGGCTA TTGGAAGCCG GGATTACCGA AGCTCGACAG CATCACCTGG CGCCCGATCG TCGATAACAA TACCCGTGCG GCGATGTTGC AGACCGGCGA GGCCACTTTT GCCTTCCCGA TCCCTTATGA GCAGGCCAAG GTGCTGGAAG GTAATGCCAA GCTTGATCTG GTGGCTGCGC CGTCGATTCT GCAACGCTAT ATCAGCCTGA ATGTCACCCA GAAGCCGTTT GATAACCTGA AAGTACGCCA GGCGCTGAAC TACGCCATCA ACAAAGATGC GCTGATCAAG GTAGCGTTCG CCGGCTACGC GGTACCGGCA GAAGGCCCGG TGCCGCCGGC GATTGACTTC GCCACGCGTT ATAAGCCCTG GCCATACGAT CCGGCCAAAG CGCGCGAACT GCTGAAGGAG GCCGGTTATC CGAACGGTTT CACTACCACT TTATGGTCGT CCCATAACCA CAGCACCGCG CAGAAAGTGC TGCAGTTTGC CCAACAGCAG TTGGCGCAGG TTGGGGTGAA AGTGACGCTG ACCGCGATGG ATGCCGGTCA GCGTGCGGCA CAGGTTGAAA GCGTTGGGGT GAAAGACACC GGTGTGCGCA TGTTCTATAC CGGTTGGTCC GCGTCGACCG GCGAGGCGGA CTGGGCGCTG TCGCCGCTGT TCTCTACTCA GGCGGCACCT CCCAAGCAGT TCAACACCGC GTTCTACAGT AACCCGCAGG TGGACAAGGA TCTGACCGGC GCGCTGGCGA CCACCGATCG CGCCGAAAAG CAGAAGTTGT ACAAGGACGC GCAGGATCGT ATCTGGGCTG ATGCGCCATG GATCTTCCTG GCAACCGAAC GCCTGCTGTC GGCCAATAAC AAGCAGCTGA GCGGTTTCTA TGTGATGCCG GATACTTCGT TCAACTTTGA TAACGCTGAC CTTAAATAA
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Protein sequence | MKHTFKRKAL AAVVLLAAVG AGPAWAAKDA VIAVASNFTT LDPYDANDTL SQAVAKSFYQ GLFGFDKDMK LVNVLADSYE VSPDGLTYTV KLHPGVKFHD GTEFNAEAVK VNLDRASNPD NHLKRYNLFK MIDKTEVVDA TTVKIVLKAP FSAFINNLAH PAAVIISPAA LKQYGKEIGF HPVGTGPYQF VTWNQTDFVK VKKFDGYWKP GLPKLDSITW RPIVDNNTRA AMLQTGEATF AFPIPYEQAK VLEGNAKLDL VAAPSILQRY ISLNVTQKPF DNLKVRQALN YAINKDALIK VAFAGYAVPA EGPVPPAIDF ATRYKPWPYD PAKARELLKE AGYPNGFTTT LWSSHNHSTA QKVLQFAQQQ LAQVGVKVTL TAMDAGQRAA QVESVGVKDT GVRMFYTGWS ASTGEADWAL SPLFSTQAAP PKQFNTAFYS NPQVDKDLTG ALATTDRAEK QKLYKDAQDR IWADAPWIFL ATERLLSANN KQLSGFYVMP DTSFNFDNAD LK
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