Gene Spro_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1506 
Symbol 
ID5602702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1641660 
End bp1642322 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID640937038 
Producthypothetical protein 
Protein accessionYP_001477738 
Protein GI157369749 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCT GGCTGTTCTG GCTGCTGTGT TGGCCATTTG GCGTGATGGC AATAAACGTC 
GGCACCCTGA CGTTTGCGAT GGATCAAGAC CAATCGTTCA CCGCCAAGCG GGTGCTGAAC
AACAACCGCA GCGCGCGTAT TTATCAGGTG ACTGTGCGCG CCATCGACAG ACCGGGGGAG
AAAGAAACAC GCAGCCGCCC GGCGGACGGC GAACTGCTGT TTGCCCCGCG CCAGCTGCAA
CTGCAGGCCG GGCAGGGCGA ATATTACAAG TTCTTCTACC GTGGCCCGCA GGACGATCGC
GAGCGTTATT ACCGGGTATC ATTTCGCGAA ATTCCCACCC GCCTTTTCGA CCCGGCGCAG
CGTCAAACTG CCGGCGTCAA TCTGGAGCCG ATAGTGGTGA TGGACACCAT TTTGGTGGTG
CGCCCACGCC AGAGTCATTT CGCCTATCGG TTGGATCCGC AGCGTGGCAC GCTCACTAAT
ACCGGCAACA CCTACTTCAA GTTCCTGCTC AAGCCCGGTT GTGACAGTAC CGACGAGGAG
GGGATCACCG AATACCTGCG CCCGGGTGAT ACGCTGACCC ATGCAGGCAT TCGGCTGAAA
GGGCAGAAAT TTATTATTTA TAACGACAAA TTTATCAGCG TCGATAAAAG CTGCATTAAC
TAA
 
Protein sequence
MRSWLFWLLC WPFGVMAINV GTLTFAMDQD QSFTAKRVLN NNRSARIYQV TVRAIDRPGE 
KETRSRPADG ELLFAPRQLQ LQAGQGEYYK FFYRGPQDDR ERYYRVSFRE IPTRLFDPAQ
RQTAGVNLEP IVVMDTILVV RPRQSHFAYR LDPQRGTLTN TGNTYFKFLL KPGCDSTDEE
GITEYLRPGD TLTHAGIRLK GQKFIIYNDK FISVDKSCIN