| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1349 |
|---|
| Symbol | |
|---|
| ID | 5605819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1480047 |
|---|
| End bp | 1480940 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936881 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001477581 |
|---|
| Protein GI | 157369592 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000462626 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTT CCAGCGATAA CATTGAGCTG TTTCTGGCGG TACTGGATCG CGGGTCGTTT
TCCGCTGCAG CCCGTTCGCT GCGGCGTGTC CCTTCGGCGG TCAGCATGGG GATCGCCAAC
ATGGAGGCGG AACTGGGGTT TCAGTTGTTT GATCGCTCAC ACCGGGAACC GCTACCCACC
CCGCTGGCGT TGGCACTGGC GCCGCATGCG CGGCTGATCG CCGATCAGCT AAAACAACTA
CAGAACCACG CCATCGAATT ATCCCAGGGG CTGGAAAGCA CTCTGTCGGT CGGTGTCGCC
TCGGACATTA ACAGCAGCGG CCTGTTGGCT GCGGTCAAAA CGCTGGCGGA ACGCTACCCG
TTGCTGAATA TCGAAGTGCT GACCGCCCCG CAGGACGACG TGTTGCATAT GCTGCATCAG
GGCAGGATTG GCGTTGCTCT GGCGTTCGGT GGGCTCAATA TCAACAGCCA GGAGCAGTTC
CACTTTGTCG GCGCTGAATC ACTGGTTGCT ACGCTCTCAC CTTCGCACCC GGCGCTGAAC
GGGGCGGCAG ACGAGCTGTT TCTCGAAGAT CTGGTTAACG TACGGCAGAT TATGGTGGCC
AGCCGCGATT TGCCGATTAC CGATTTGCGG CCGCAGGTGG CGGAGTCCTA TTGGCGTACC
GATAGCCTGC CGATGGCGCT GAGCATGGTG GAGGCCGGTT TGGGCTGGGG GAATTTCCCG
CTGTCGTTGA CCGCGCCCTT GTTGGCGCAG CAACGGCTGG TCAGGTTGAA ATTCAAAAAC
ACCAAAAACG AACTGCGCCT GCCGATGCAC CTGATCTGGC TGAAAAACAG GCCGCTGGAG
AAGGCCGCCC ATGAACTGGT GGCGTTAATG CGGGACAGGC CGCAAGCGGA ATAA
|
|---|
| Protein sequence | MNFSSDNIEL FLAVLDRGSF SAAARSLRRV PSAVSMGIAN MEAELGFQLF DRSHREPLPT
PLALALAPHA RLIADQLKQL QNHAIELSQG LESTLSVGVA SDINSSGLLA AVKTLAERYP
LLNIEVLTAP QDDVLHMLHQ GRIGVALAFG GLNINSQEQF HFVGAESLVA TLSPSHPALN
GAADELFLED LVNVRQIMVA SRDLPITDLR PQVAESYWRT DSLPMALSMV EAGLGWGNFP
LSLTAPLLAQ QRLVRLKFKN TKNELRLPMH LIWLKNRPLE KAAHELVALM RDRPQAE
|
|---|
| |