Gene Spro_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1206 
Symbol 
ID5602924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1322112 
End bp1322672 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID640936727 
ProductLPS-assembly lipoprotein RlpB 
Protein accessionYP_001477438 
Protein GI157369449 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.730747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACAAC GTATTCTGAC GCTGTTGCTG GGGTTGGCGG TGCTGGTCAC CGCCGGCTGC 
GGTTTTCACC TGCGTGGCAC CACGCAGGTA CCCTCGGAAA TGAAAACGCT GATTCTGGAC
AGCTCAGACC CTTATGGTCC GCTGACCCGC GCCGTGCGTG AGCAATTACG TCTGAGCGAC
GTGACCATTG TCAAAGATGC AAAACGCAAG GATCTCCCTT CCCTGCGCAT CATTGGCGCC
ACCGAAAGCC AGGATACCGC CTCTATCTTC CAGGACGGTA AAACCGCTGA GTACCAGATG
GTGCTGACGG TCCAGGCACA GGTGTTGATC CCGGGTCACG ATCTGTATCC GCTGAACGTG
AAAGTATTCC GTTCGTTCTT CGATAACCCG CTGACCGCAC TGGCAAAAGA TTCCGAACAG
GAAATTATTC GCCAAGAAAT GCGTGAGCAG GCCGCCCAGC AACTGGTGCG TAAACTGCTG
ACGGTGCACG CGGCGGAAGA AGAAACGCAG CAGAAAGCCG CTGCGGCCGG TGAAAAAGCG
GCCAGTCGCG TAGATCAATG A
 
Protein sequence
MRQRILTLLL GLAVLVTAGC GFHLRGTTQV PSEMKTLILD SSDPYGPLTR AVREQLRLSD 
VTIVKDAKRK DLPSLRIIGA TESQDTASIF QDGKTAEYQM VLTVQAQVLI PGHDLYPLNV
KVFRSFFDNP LTALAKDSEQ EIIRQEMREQ AAQQLVRKLL TVHAAEEETQ QKAAAAGEKA
ASRVDQ