| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1182 |
|---|
| Symbol | |
|---|
| ID | 5602833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1300601 |
|---|
| End bp | 1301092 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640936703 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_001477414 |
|---|
| Protein GI | 157369425 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATGA TGATGAACGG CAAGATAACG ACTTTTTTTG AAGACAAAGG CTTCGGCTTT
ATTACCGATG AGAACGGGGA AAATCGTTAT TTTCACGTGA TTAAAGTGCA GAACCCTGAG
CTGATTAAGA AAAACGCGGC GGTGACTTTC GAACCGACCA ACAACACCAA AGGCCCATCG
GCGTTTGCGG TCAAGGTGCT GGCGTCGAGC AAGTACATCA TCATCGCCAA CGAAAGAATC
AAGATCACCA GCATCAAATC CTTCAACACC TTCACCAAAG AAGTGCCGGT GAAAGCGGAC
GTGGATAAAG AAAATACCGT GCTGTCGGTC GGCCTGTTGA TGAACCGCAT TCGCCCGCAG
TCCGAAGAAG CGCCGCAAAC CATGCAAACG CTGCGCATGC TGACCATCAC CACCTTCCAG
AACGACACCC ATACCTTCTC AGAACATGAG ATCGACATGG ATGAAACCCT GAAAGTGCTG
AAAAGCCTGT AA
|
|---|
| Protein sequence | MRMMMNGKIT TFFEDKGFGF ITDENGENRY FHVIKVQNPE LIKKNAAVTF EPTNNTKGPS
AFAVKVLASS KYIIIANERI KITSIKSFNT FTKEVPVKAD VDKENTVLSV GLLMNRIRPQ
SEEAPQTMQT LRMLTITTFQ NDTHTFSEHE IDMDETLKVL KSL
|
|---|
| |