| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1162 |
|---|
| Symbol | |
|---|
| ID | 5602555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1279874 |
|---|
| End bp | 1280941 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640936682 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_001477394 |
|---|
| Protein GI | 157369405 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000580503 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00152938 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG TTTGCGTACT GGGCAACGGT CAGTTAGGGC GCATGCTGCG CCAGGCCGGT
GAACCGCTGG GCATCGCCGT GTACCCGGTA GGCCTCGACG CCGAACCGGA AGCCGTGCCC
TACCAGAACA GCGTGATCAC CGCCGAAATC GAACGCTGGC CGGAAACCGC GCTGACGCGC
GAACTGGCAA CCCACAACAG CTTCGTCAAC CGTGATATTT TCCCGCGTCT GGCAGATCGC
CTGACGCAAA AACAGTTGCT CGATCAGCTT GGCCTGGCTA CCGCGCCGTG GCAACTGCTG
GCTGACGCCG CCGAATGGCC ACAGGTATTC GCTACTCTGG GTGAACTGGC GATCGTCAAA
CGTCGCGTTG GCGGTTACGA CGGCCGCGGC CAGTGGCGTT TACGCCCAGG GCAAGAAGCC
GAATTGCCGG CCGATGCCTA TGGCGAATGT ATCGTCGAGC AAGGGATTAA CTTCTCCGGT
GAGGTGTCAC TGGTTGGCGC ACGCGGGCAT GACGGCCAGT CGGTGTTCTA TCCGCTGACC
CATAACCTGC ATGAAGAAGG CATTCTGCGC ACCAGCGTGG CACTGCCGCA GCCCAACCCT
GCCCTGCAAC GGCAGGCGGA ACAAATGCTG ACGGCCATCC TTGATGAGCT GAACTACGTC
GGCGTAATGG CGATGGAGTG CTTTATCGTT GGCGATCGCC TGTTGATTAA CGAGCTGGCC
CCCCGGGTAC ACAACAGTGG CCACTGGACG CAGAACGGCG CGTCTATCAG CCAGTTCGAA
CTGCATCTGC GCGCTATTCT CGCCCTGCCG CTGCCAAAAC CGGTAGTGAG CACACCGTCG
GTGATGGTCA ACCTGATTGG CACCGCAGTG AATCAGCAGT GGCTGGCGTT ACCGCTGGTG
CATCTGCACT GGTATGAGAA AGAGGTGCGC GAAGGTCGCA AGGTCGGGCA CCTGAACCTG
AACGATCCTG ACGCCGCTGC GCTGCTGCAG ACCTTGCAGG CACTGGCTCC GCTATTGCCA
ACCGAATACC AAAGCGGTCT GACCTGGGCG CAGCAAAAGC TGGCTTAA
|
|---|
| Protein sequence | MKPVCVLGNG QLGRMLRQAG EPLGIAVYPV GLDAEPEAVP YQNSVITAEI ERWPETALTR
ELATHNSFVN RDIFPRLADR LTQKQLLDQL GLATAPWQLL ADAAEWPQVF ATLGELAIVK
RRVGGYDGRG QWRLRPGQEA ELPADAYGEC IVEQGINFSG EVSLVGARGH DGQSVFYPLT
HNLHEEGILR TSVALPQPNP ALQRQAEQML TAILDELNYV GVMAMECFIV GDRLLINELA
PRVHNSGHWT QNGASISQFE LHLRAILALP LPKPVVSTPS VMVNLIGTAV NQQWLALPLV
HLHWYEKEVR EGRKVGHLNL NDPDAAALLQ TLQALAPLLP TEYQSGLTWA QQKLA
|
|---|
| |