Gene Spro_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1051 
Symbol 
ID5606694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1156692 
End bp1157216 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640936570 
Productfimbrial protein 
Protein accessionYP_001477283 
Protein GI157369294 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0357059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTT TCAAGCCCCT GATGGCGGCC GGGCTGGCGT TGCTGCTGCC TGCCGCCGCC 
CTGGCCGACA GCGCCAGCAT CAACGTGACC GGGCGGATAC TCTCTTCCGC CTGCCAGCCG
GAGGTCAATC CGCTGAACGT GCCGCTCGGC ACCCTGTCGC AAAGCGCCCT GGCAGGCAAG
GGCAGCACCG CCTCGGCCAC CCGCTTTACC CTGCGGCTGA AAAACTGCCC GGCGGAAATC
AGCCAGGTGC AGGTGCGGTT TGACGGCAGC GCCGTCAGCG GTGACACCAG CGTACTGGCG
CTGACGGCGG GAACCGGCGT TGCCGGCGGC GTCGGCATTC AATTGCAGGA TGCCAATGCC
GCCGTGCTGC GGTTTGGGCA ACCCTCGGCG GCCATGGCGA TCCAGGGCGG TGCCGGCAGT
GTTTCATCAC TGGCCTTTAC CGCCCGTTAT ATCGCCATCA GCGACACCGT AAGCGCCGGC
AGCGCCAATG CCAGTGCCAC CTTCACCATT TTGTACAGCA ATTAA
 
Protein sequence
MTLFKPLMAA GLALLLPAAA LADSASINVT GRILSSACQP EVNPLNVPLG TLSQSALAGK 
GSTASATRFT LRLKNCPAEI SQVQVRFDGS AVSGDTSVLA LTAGTGVAGG VGIQLQDANA
AVLRFGQPSA AMAIQGGAGS VSSLAFTARY IAISDTVSAG SANASATFTI LYSN