Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1050 |
Symbol | |
ID | 5606693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1156173 |
End bp | 1156664 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936569 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001477282 |
Protein GI | 157369293 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0346047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTAA CCGATATCGT TCCAAGGTCC CCCGTATTGT TGCCCCCGCA TCTGGCAGAG AAATTAACGC CGAACGAGCA TCTGGTGCTG CAGGCCCTGC TCAACGGGCA GGACCTGACT ACCATTGCCC AACGGCGTAA CCGCAATATC CGCACCGTCA GCAACCACAA GCAACGGGCG ATGGAAAAAC TGGGCCTGAA CAACAACGCC ATGCTGTACG CGCTGGCCGC CCTGCTGAGT CCGCCCTTGC CGCAGGCCTC CCCTCAGCAA ATGCAGTCGC TCTCACCGCG GGAGCATCGG GTGCTGGCGG GCCTGCTGCA GGGTAAAACG GTGGGTGCGA TTGCCCGCGA GCAGCATAAA AGCATCAAAA CCATCAGCCT GCAAAAACAG CGGCTGATGG AAAAACTGAG GTTATGCAGT GCGGTAGACT TGTTCAGGTC TGCGCCCGGA CAGGCGCAGA CGCTGTTGGC CAACTGGGGG CAGGTTTTTT AA
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Protein sequence | MPLTDIVPRS PVLLPPHLAE KLTPNEHLVL QALLNGQDLT TIAQRRNRNI RTVSNHKQRA MEKLGLNNNA MLYALAALLS PPLPQASPQQ MQSLSPREHR VLAGLLQGKT VGAIAREQHK SIKTISLQKQ RLMEKLRLCS AVDLFRSAPG QAQTLLANWG QVF
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