Gene Spro_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1050 
Symbol 
ID5606693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1156173 
End bp1156664 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID640936569 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001477282 
Protein GI157369293 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0346047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAA CCGATATCGT TCCAAGGTCC CCCGTATTGT TGCCCCCGCA TCTGGCAGAG 
AAATTAACGC CGAACGAGCA TCTGGTGCTG CAGGCCCTGC TCAACGGGCA GGACCTGACT
ACCATTGCCC AACGGCGTAA CCGCAATATC CGCACCGTCA GCAACCACAA GCAACGGGCG
ATGGAAAAAC TGGGCCTGAA CAACAACGCC ATGCTGTACG CGCTGGCCGC CCTGCTGAGT
CCGCCCTTGC CGCAGGCCTC CCCTCAGCAA ATGCAGTCGC TCTCACCGCG GGAGCATCGG
GTGCTGGCGG GCCTGCTGCA GGGTAAAACG GTGGGTGCGA TTGCCCGCGA GCAGCATAAA
AGCATCAAAA CCATCAGCCT GCAAAAACAG CGGCTGATGG AAAAACTGAG GTTATGCAGT
GCGGTAGACT TGTTCAGGTC TGCGCCCGGA CAGGCGCAGA CGCTGTTGGC CAACTGGGGG
CAGGTTTTTT AA
 
Protein sequence
MPLTDIVPRS PVLLPPHLAE KLTPNEHLVL QALLNGQDLT TIAQRRNRNI RTVSNHKQRA 
MEKLGLNNNA MLYALAALLS PPLPQASPQQ MQSLSPREHR VLAGLLQGKT VGAIAREQHK
SIKTISLQKQ RLMEKLRLCS AVDLFRSAPG QAQTLLANWG QVF