| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1049 |
|---|
| Symbol | |
|---|
| ID | 5606692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1154333 |
|---|
| End bp | 1156156 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936568 |
|---|
| Product | maltodextrin glucosidase |
|---|
| Protein accession | YP_001477281 |
|---|
| Protein GI | 157369292 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0895639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACG CCTGGCATCA ACCGGTCCCG CCCTTCGTGG TGAAGAAGGG GCAACGTCTT
GATATCACGC TGTGGTTACA GGGTGATGAT GTGCCCGAAC GGGTGTTTTT ACGCGCCGAA
CCGGATAATG AAGAATGGTT GCTGACGATG AAAGTGCAGC ATATTGACGG GCTGCATCGC
TATCAGGCCA GTTTGACGCT CAATGAGGGG GAGCCAACCC GTCGTTACTG CTTCAAGCTG
GTTTGGGCTG CCAGTCAGCA ATGGTTCGGC CCCCAGGGTT GGTCGCTGAC GCCGCCGGGG
CAACTGGCGC AGTTTGCTGT CGACGTGCCC GACCGCAGCC CGGCCTGGGT GGCGGATCAG
GTTTTCTATC AAATTTTCCC CGATCGCTTC TCCAGTAGCG GGGGGGAACA TTGCATTCAA
AGTGGCAGTT ATCGCCATCA TGCGGCCGGT TGCGATGTTG TGCGTCAGGA TTGGCACCAT
CCGTTGGAAG ACCGGCATGC CGCGTCCACC TTCTATGGTG GCGATCTGGA TGGCATCAGC
CAAAAACTGC CTTATCTACA GCAGCTGGGC GTGACGGCGC TGTATCTGAA TCCGATTTTC
ACCGCGCCCA GCGTACATAA ATACGATACC GAAGATTATT ACCAGGTCGA TCCCTATCTC
GGCGGCAACG CCGCCCTGCA GCGTTTGCGA GTGAGTACTC ACAAGGTGGG GATGAAACTG
GTGCTGGACG GGGTGTTTAA CCATACCGGC GATTCGCATC CGTGGTTTGA CCGCCACCAG
CAAGGGGATA ACGGCGCTTG CCATCACCCC GATTCACCTT ACCGTGGCTG GTTCAATTTT
TACCCCGATG GCCGCGCGCT CGACTGGAAA GGGAATGCCA GTCTGCCGAA GCTTAACTTC
GCTGAACCAC AGGTAGCGGA AGCGATTTAT CGCGGTGACG GTAGCGTGGT GCGTCACTGG
TTACGGCCGC CGTACAACAT CGACGGTTGG CGGCTGGATG TGGTGCACAT GCTGGGTGAG
AACGGGGGCG CTACCGGCAA TTTGCAGCAT CTGGCGGGCA TTTATCAGGC GGTTAAACAG
GAAAACCCGC AGGCCTACGT GCTGGGCGAG CATTTTGGCG ACGCTCGTCG CTGGCTGCAT
GCCGGCGTGG AAGATGCGGC AATGAATTAC ATGGGCTTTG CCCTGCCGGT GCGGGGGTTC
CTCGCCGGGC TGGACGTGGC GCACCACCCG GTGCAGCTGG ATGCGGCGGA CTGCGCCCAG
TGGATGGACG GTTATCGGGC CGGGCTGCCG CATGGCCGTC AGTTGATTCA GTTCAACCAG
CTCGACAGCC ATGACACTGC GCGCTTTCTG ACGCTATTAC AGGGCAATCA GGCGCGGATG
CGCATGGCGG CGGTGTGGCT GATGAGCTGG ATAGGCGTAC CCTGCCTATA TTATGGCGAC
GAGATTGGTC TGGATGGGGC CAACGACCCG TTCTGTCGCA AGCCTTTTCC GTGGGATGAA
AGCCAGTGGG ATCAGAACCT GTTGGCCCTG TACCAGCGCA TGGCGGCGCT GCGCAAACAG
AGCCTGGCGC TGCGTCGCGG CGGTTGTCAG GTGCTGCATG CCGCCGCTGA AACGCTGGTA
TTTGTGCGTA TTTACCAACA GGAACAGGTG TTGGTGGCGT TACAGCGTGA CGGCAGCGGC
AGCGTGACCC TGCCACACGG CCCGTTGCTG GCCGCAGGCC AATGGCAACG GCTGGAAGGG
GATGGCGAGT TGAATGACAC GCAAAACGCG ATCTCGCTGC AACTGGGCAA AGAGACGGTA
AGCCTGTGGC GGTTAACAGG CTAA
|
|---|
| Protein sequence | MLNAWHQPVP PFVVKKGQRL DITLWLQGDD VPERVFLRAE PDNEEWLLTM KVQHIDGLHR
YQASLTLNEG EPTRRYCFKL VWAASQQWFG PQGWSLTPPG QLAQFAVDVP DRSPAWVADQ
VFYQIFPDRF SSSGGEHCIQ SGSYRHHAAG CDVVRQDWHH PLEDRHAAST FYGGDLDGIS
QKLPYLQQLG VTALYLNPIF TAPSVHKYDT EDYYQVDPYL GGNAALQRLR VSTHKVGMKL
VLDGVFNHTG DSHPWFDRHQ QGDNGACHHP DSPYRGWFNF YPDGRALDWK GNASLPKLNF
AEPQVAEAIY RGDGSVVRHW LRPPYNIDGW RLDVVHMLGE NGGATGNLQH LAGIYQAVKQ
ENPQAYVLGE HFGDARRWLH AGVEDAAMNY MGFALPVRGF LAGLDVAHHP VQLDAADCAQ
WMDGYRAGLP HGRQLIQFNQ LDSHDTARFL TLLQGNQARM RMAAVWLMSW IGVPCLYYGD
EIGLDGANDP FCRKPFPWDE SQWDQNLLAL YQRMAALRKQ SLALRRGGCQ VLHAAAETLV
FVRIYQQEQV LVALQRDGSG SVTLPHGPLL AAGQWQRLEG DGELNDTQNA ISLQLGKETV
SLWRLTG
|
|---|
| |