Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0931 |
Symbol | |
ID | 5603555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1031190 |
End bp | 1032029 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640936452 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001477165 |
Protein GI | 157369176 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0628212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGA TTGATGAACG CCTGCGCGGG GAATATCCGC AGCTCACGCC GCAGGAACAG CGGGTGGCCG ATTTTATTTT CGATCACTTC GATGACCTGA TCAGCTACAA CAGCGCCGAG CTGGCGCGGC TGAGCGGGGT ATCCAAAGCC ACCGTCAGCC GCTTGTTCAA ACGCCTGGGT TATCCGAGCT ACCGCGCGAT GCGTGACGAA TTGCGCACTC TGCGCCAGAG CGGTATGCCG CTGACCGATA ACCGTGACGC GGTGCAGGGC AATACCCTGT TGGCGCGCCA CTACAAGCAG GAAATGGCTA ACCTTACCCA GTGGGTGAAC CATATTGATG CCGAGCAGTT CAACGCAGTG ATTGCTGCTT TGGTGCAGGC GCGGCGAGTG GTGTTAATGG GGTTTCGCAA CAGCTATCCG GTGGCGATGC ACCTGCGCCA GCAGCTGATG CAGGTGCGTG AGCAGGTGTT ACTGGTGCCG CAGCCGGGTC AGACACTGGC GGAAGAGCTG GTGAGTCTGT CCCCGCAAGA TGTAGCGATA GTGGTGGCGT TTCGCCGCCG ACCGCGCCAG GTGCGGGCGT TGTTGACGCA GTTGCAGGTT CAGCAGGTAC CGACACTGCT GGTGTGTGAA CCCCAGGCAC AGGCGCTAAT CCCGCTGGCT AACTGGCATC TGGCGGCACC GCTCGACAGC GTTTCCGCCT TTGACAGCTA TTCCGCCGCC ATGAGTCTGG CCAACCTGCT CAGCAATGCT CTGCTGCACG AGACGTTGGC GCAAGGGCGG CAACGAATTC ACCAAATTGC CGATCTGTAT ATGGGGCTGG ATGAGCTGGA GCAGCGCTGA
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Protein sequence | MQQIDERLRG EYPQLTPQEQ RVADFIFDHF DDLISYNSAE LARLSGVSKA TVSRLFKRLG YPSYRAMRDE LRTLRQSGMP LTDNRDAVQG NTLLARHYKQ EMANLTQWVN HIDAEQFNAV IAALVQARRV VLMGFRNSYP VAMHLRQQLM QVREQVLLVP QPGQTLAEEL VSLSPQDVAI VVAFRRRPRQ VRALLTQLQV QQVPTLLVCE PQAQALIPLA NWHLAAPLDS VSAFDSYSAA MSLANLLSNA LLHETLAQGR QRIHQIADLY MGLDELEQR
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