| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0874 |
|---|
| Symbol | |
|---|
| ID | 5602569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 968036 |
|---|
| End bp | 970099 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640936389 |
|---|
| Product | replication gene A |
|---|
| Protein accession | YP_001477108 |
|---|
| Protein GI | 157369119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0744565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.152153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTT CCCCCGGCCT TATTGGCCCC CCGCCTCCAG CCTCGTTTGA AGGTGCCTAT
CCCTGGAATG CCCCGCGGCC AGCCATTGGC CGCGAACCCA CGCTAAACCG CGATCGGTTA
CGCCAGTGGC AAGCCGCGCT GCGGCGCGTC AATTCTCTAC CTTATTATCT GCGTATACAG
TTTACCGAGC GCCACCAACA TCTGTTGAGT CAACAAGGTT CGAAGGCTGC CTGGCACTAT
TTGGTGTTGG TTTTCGAACG TCGTATATGG CCGCGTATTC AGCAAGTGAA CGATAAATTT
GCTCTGAATC GGCAGGCCTC AATGCGCTTT GGTAGCGAGT CCGACAACTA TAACGCTTTG
CCCACGTTGG GTGACAAGGC GCTGGAACAG TTGGCAAAAC GTATCGCCGG CCAGTTACTG
GCGCTTTATC AAAGCGAGTG CGACACCCTA CTGACCAGGC ATGCGGGAGA CTCTTCTGTC
CTGCTGCAAA ACGAATTTCA ATCGCGGTTG TATGGCCAGA TTGCCGGTAT GGCACGCGCT
TTTAATATTC AGCCCATGCA TTGGCACTGT TATCGCAAGG GGTTGCTGGA CAGCCACCGT
GCGGTAGCGG CACTGTCGAG ACTGACCAGC GATCGTTGGT GGCTGCGACG CCTGAAGATG
CAACGTATGC AGTGGCGCGA AGCGCTGCTG ATCGCCATTG GCAACGTCAG CCGCAACACA
TCACCCTATG CCAGCCGGCA GGCCATTCGT GACGTGAAGG CGCGACGCCA GTCAAACCTG
GATTATCTTC GCCGCTGCGA TTTGGAAAAT ACCGTTACCG GGGAGCGTAT CGATCTGATG
GAGAAAGTGC TCGGCAGCAT TGCCAACCCG GCGATCCGCC GTATGGAGCT AATGAATACC
CTCGCAGGCA TTGAAACCTA CGCCGCGCGC AGCAGCCACA TCGGCCTGTT TGTCACCCTG
ACTACCCCCT CCCGTTTTCA TCCCATGCGC ACTGCCGGCG ACCGCGGTAA GTCACGCTTT
AATCACCGCT GGGACCGCGA AGATTTTACC CCCAAAGACG GCCAACGCTA CCTGGTGAAG
CAATGGAGCA AAATGCGCAC TGCTTTCAAA GATCGCCAGT TGCAGGTCTA CGGTATCCGC
GTGGTGGAAC CGCATCACGA CGGCACACCG CATTGGCATC TGATGCTGTT TACCCCTCAA
CCCCATCGTC AGCAGGTGAT CGATATTCTG CGCCGTTATG CACTGCAGCA AGATGCCGGG
GAACCCGGAG CGCAAGAGAA TCGTCTCCAG TATAAGCACC TGAATCGAGA GGGAGCGACC
GCTTACATGG CCAAATACAT TGCCAAGAAT CTCGATGGCT ATGCACTGGA GGAAGAACTC
GATCATGAGA CCGGTAGCCC GCTGAGTGAA ACCGCCAATG CCGTCAGCGC CTGGGCCAGC
ACCTGGCGTA TTCCGCAGTT TCATCCTTTT GGTTTGCCCA GCATAGGCGC ATATCGCGAG
TGTCGTCGCA TTCGTGGGCA AAGCCTGACG CAGCAGTTCG ATGCGCGAAC CGAAGCCGTA
CGCGCCGCCG CCGATACGGG AGATTTTGCC GGTTATATCA ATGCTCAGGG CGGTGCTAAC
GTGCCGCGCA GCCGGCAGTG GGTGCGCGTA GCGCGTGATG ATGCGCCCAC GCTGAACAGC
TATGACGAAC GAGTGCAAAA GGTGGTCGGT ATTTATGCTC CTCATCTGGG CCCTGATCGG
GTGTACCGGA CCCGTACGCT ACAATGGCGC ATCGTCGCTA AAAACCGCGA ACCTGCGACA
CCTTGGAGTT CTGCCAATAA CTGTGGATCC TCCTCCTTTA ACGCCCCAAA ACCGGCGCCC
TCCGCACGTC TGACTCCAGC ACAACAGCAG TATTGCCTGA CTATTGCCCG CGATCTTCGG
CAGACAGGCA TCGATCCGCA GCGCTGGCAG TTGGAAGTAT TAGCAAGAGG AGGGAAAATC
AGCTTTGACG GACAACTTGT ACAATTTCCG CTAATCAATG ACTGGGCAAA TTTTTACTGC
ACAAATGATA AATCCAATCA TTGA
|
|---|
| Protein sequence | MPASPGLIGP PPPASFEGAY PWNAPRPAIG REPTLNRDRL RQWQAALRRV NSLPYYLRIQ
FTERHQHLLS QQGSKAAWHY LVLVFERRIW PRIQQVNDKF ALNRQASMRF GSESDNYNAL
PTLGDKALEQ LAKRIAGQLL ALYQSECDTL LTRHAGDSSV LLQNEFQSRL YGQIAGMARA
FNIQPMHWHC YRKGLLDSHR AVAALSRLTS DRWWLRRLKM QRMQWREALL IAIGNVSRNT
SPYASRQAIR DVKARRQSNL DYLRRCDLEN TVTGERIDLM EKVLGSIANP AIRRMELMNT
LAGIETYAAR SSHIGLFVTL TTPSRFHPMR TAGDRGKSRF NHRWDREDFT PKDGQRYLVK
QWSKMRTAFK DRQLQVYGIR VVEPHHDGTP HWHLMLFTPQ PHRQQVIDIL RRYALQQDAG
EPGAQENRLQ YKHLNREGAT AYMAKYIAKN LDGYALEEEL DHETGSPLSE TANAVSAWAS
TWRIPQFHPF GLPSIGAYRE CRRIRGQSLT QQFDARTEAV RAAADTGDFA GYINAQGGAN
VPRSRQWVRV ARDDAPTLNS YDERVQKVVG IYAPHLGPDR VYRTRTLQWR IVAKNREPAT
PWSSANNCGS SSFNAPKPAP SARLTPAQQQ YCLTIARDLR QTGIDPQRWQ LEVLARGGKI
SFDGQLVQFP LINDWANFYC TNDKSNH
|
|---|
| |