Gene Spro_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0824 
Symbol 
ID5603078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp918680 
End bp919450 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content53% 
IMG OID640936335 
Productextracellular solute-binding protein 
Protein accessionYP_001477058 
Protein GI157369069 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.471601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAC GCATAATTCT GATTGGCGCC TGCCTGGCCG CCACCCTGTC GGCTTCTGCT 
CTGGCGGCAG AACCCACTTA CGTCGTCGGC TCCGGCGGCA CCTATCGTCC GTTCGAATTC
GAAAACAGCA GCAAACAGCT GGAAGGCTTT GATATTGATA TCATCAAGGC CGTCGCCAAG
GCCGAAGGTT TCCAGGTCAA GCTGGTAAAT ACACCGTGGG AAGGCATCTT TGCCACGCTG
AACTCCGGCG ATCGCGACAT CATTATTTCC GGCATCACCA TCACCGATAA ACGCAAGCAA
ATGGTTGATT TCTCTGCGCC TTACTTCCCG GCGGAGCAGA CCATCGTGGT TCCCAAAGAC
TCTCAAGTGA ACTCTATTGC CGCGCTGAAA GCGCTGAAAG TTGGCGTGGT GAACTCCAGC
ACCGGCGACA TCGTGGTATC CGACGTGCTG GGTAAAAACA GCACCGCCAT CAAACGTTTC
GACAATACCC CGCTGCTGCT GCAGGAGTTG TACGAAGACG GCATCGGCGC AGCCGTAGGT
GACGTTGGCG TAGCCAAGTT CTACATAAAA ACCCACCCGG AAAAAGAGTT CAAATTGGTG
TCAGACGCCA AATTCGAACG TCAGTATTTC GGCATTGCCG TTGCCAAAGG CAACGATGAA
CTACGCGGTA AAATCAACGC CGGCCTGAAG AAAATCATCG CCGACGGCAC CTACGCCAAA
ATTTACCAGA CCTGGTTTGA CAGCAACGTG CCGACACTGC CTGCCGAATA A
 
Protein sequence
MLKRIILIGA CLAATLSASA LAAEPTYVVG SGGTYRPFEF ENSSKQLEGF DIDIIKAVAK 
AEGFQVKLVN TPWEGIFATL NSGDRDIIIS GITITDKRKQ MVDFSAPYFP AEQTIVVPKD
SQVNSIAALK ALKVGVVNSS TGDIVVSDVL GKNSTAIKRF DNTPLLLQEL YEDGIGAAVG
DVGVAKFYIK THPEKEFKLV SDAKFERQYF GIAVAKGNDE LRGKINAGLK KIIADGTYAK
IYQTWFDSNV PTLPAE