Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0647 |
Symbol | |
ID | 5606730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 712258 |
End bp | 713202 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936158 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001476881 |
Protein GI | 157368892 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.238426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGA TCCAGGCCAT GCGCATTTTC ACCCGCATCG TCGAACTGGG CAGTTTCAGC CGGGCAGCCG AGCGTTTGCA GTTACCTCGT GCCACGGTCA GCAATGCCCT CAAACGGCTC GAGCAGCGCC TCGGCGTCCG TTTGCTGATC CGCACCACCC GCCAGGTGCA GGTGACCAGC GAAGGCACGC TGTATTATCA GCGCTGCGTG CAGTTGCTGG GTGCGCTGGA AGAAGCAGAC ACGCTGTTCA GCCACCATAA GCTGCAGCCC TCCGGCAAGG TACGCATTGA TATGCCCCAT TCGCTGGCGC GTGAAATCGT GATCCCCGCT CTGGATGACT TTTACCAACG TTATCCGGAT CTGACTCTGG CGTTGGGCGC CAACGATACT CATGTTGATC TGCTGCGCGA GGGGGTGGAT TGCGTGCTGC GCGCCTGGGA AACCGAAGAT GACAGCCTGG TGGCACGACG CATCGCCATG CTGCCACAGT TGACCTGTGC TTCTCCCGGC TATCTGGCCG CGTTCGGTGT CCCCCAGTCG ATTGACCAGT TGCAGCAGCA TCAGGCGGTG GGCTATTTTT CCCTCGCCAG TAACCGTAAT TACCCGCTGG AGTTTTGCCG CAACGGTAAA GTGGAGTTGC GCGAATTGCC CGCCAGGCTG AGCGTCAGCG GTGCCGATGC TTACACCAGC GGCTGTCGCG CCGGCATGGG GCTGATACAG GCGGCGCATT ACTCGCTGGC GCCCTGGCTG CAGAAAGGGG AATTAGTCGA AGTATTGGCG GAAACCCCGC CGCCGCCGAT GCCCATTTAC ATCATGTATC CCCCCGGCCG TTTCCTTGCG CCGCGGGTCA GGGTATTGAT TGACTGGCTG ATTTGGCTGT TTGAACAGTA TCAACAGCCC AAAACGGACG TTTTTCCAGC AAACACCCGC AAACAGGGGA AATAA
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Protein sequence | MDQIQAMRIF TRIVELGSFS RAAERLQLPR ATVSNALKRL EQRLGVRLLI RTTRQVQVTS EGTLYYQRCV QLLGALEEAD TLFSHHKLQP SGKVRIDMPH SLAREIVIPA LDDFYQRYPD LTLALGANDT HVDLLREGVD CVLRAWETED DSLVARRIAM LPQLTCASPG YLAAFGVPQS IDQLQQHQAV GYFSLASNRN YPLEFCRNGK VELRELPARL SVSGADAYTS GCRAGMGLIQ AAHYSLAPWL QKGELVEVLA ETPPPPMPIY IMYPPGRFLA PRVRVLIDWL IWLFEQYQQP KTDVFPANTR KQGK
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