Gene Spro_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0636 
Symbol 
ID5606055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp701674 
End bp702816 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID640936144 
Productbeta-lactam binding protein AmpH 
Protein accessionYP_001476870 
Protein GI157368881 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.259822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAACT CTTTCTCCGC TTCATTGCTG GCGCTGAGCC TGTGTGCCGC CCCGCTGGCC 
GCGCAGGCCG CCGCCCCGCA GCTGGCCTCG CAAATCGTCG ACCAGTATGC CGAACATATT
TTCTACAACA GCGGTGCCAC CGGTATGGCG CTGGTGGTGA TCGACGGTAA CCAGGTGGTT
AACCGCAGTT TTGGCGACAC CAAACCCGGC AATAACCTGC GCCCACGCCC GGACTCGCTG
ATCCGCATTG CCTCAATCAC CAAACTGATG ACCAGTGAAG TGATGGTCAA GATGGCGGCG
GAAGGCCGGG TCAAGCTCAA CGATCCGTTG CGCAAATATG CCCCCCAAGG TGCTTACGTG
CCGGCCTATA ACACACGCCA GCCGATCACT TTGCTGAACC TGGCAACCCA CACCAGCGCC
CTGCCGCGTG AACAGCCGGG CAAGAAGCCG CCAAAAACGC CGGTCTTTAC CTGGCCGACC
AAGGCACAGC GCTGGCAGTG GCTGGAACAT GCCAACGTCA CGGTGCCACC GGGCGTGCGC
GCCTCTTATT CCAACCTGGC GTACGACCTG CTGGCGGATG CACTGTCGCG GGCGGCGGGT
AAACCTTACA CCGCGCTGCT GAAGGAAAAA ATCACCGCAC CGCTCGGCAT GGTCGACACC
ACTCTCACCC CAAGTGCCGA ACAGTGCTCA CGCCTGATGG TGGCTTCCGC CGGCCCGAGT
GCCTGCCGTG ACACCACAGC CGCGGCCGGT AGCGGCGGCG TTTACTCCAC CCCGCGCGAC
ATGCAGCGCT GGATGCAGCA ATTCCTTACC TCCAATGTCT CTGGCTCACG TAAATCGACC
GCCGCCAGCG AACAGACCAT GTACTTCCAA CGCAACGATC TGGTCTCGCT AAAAGGCATG
GACGTGCCGG GTGAAGCCAG CGCGTTAGGA TTGGGCTGGG TGTATATGGC ACCGAACGGC
GAACTGCCGG GGATTATTCA GAAAACCGGC GGTGGCGGCG GCTTTATTAC CTATATGGCG
ATGATCCCGC AGAAAAACGT CGGGGTATTT GTGGTGGTGA CCCGCTCGGA ACTGAGCAAG
TTCACCAACA TGAGCGATCC TGTGAACCGA CTGGTGAGTG ATTTGGCGGC GAATAAAAGT
TGA
 
Protein sequence
MKNSFSASLL ALSLCAAPLA AQAAAPQLAS QIVDQYAEHI FYNSGATGMA LVVIDGNQVV 
NRSFGDTKPG NNLRPRPDSL IRIASITKLM TSEVMVKMAA EGRVKLNDPL RKYAPQGAYV
PAYNTRQPIT LLNLATHTSA LPREQPGKKP PKTPVFTWPT KAQRWQWLEH ANVTVPPGVR
ASYSNLAYDL LADALSRAAG KPYTALLKEK ITAPLGMVDT TLTPSAEQCS RLMVASAGPS
ACRDTTAAAG SGGVYSTPRD MQRWMQQFLT SNVSGSRKST AASEQTMYFQ RNDLVSLKGM
DVPGEASALG LGWVYMAPNG ELPGIIQKTG GGGGFITYMA MIPQKNVGVF VVVTRSELSK
FTNMSDPVNR LVSDLAANKS