Gene Spro_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0579 
Symbol 
ID5606575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp643439 
End bp644626 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID640936087 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_001476813 
Protein GI157368824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA GACTGACCCT TACCCTGGCG ACACTGATGA TGATGTTTCC CCAAATTGTG 
GAAACGATCT ATAGCCCGGC GCTCACGCAC ATTGCCGACG GTTTTCACGT CAGCGCGGAG
GTCGCGGCGC AAACCCTGTC CTGTTACTTT TTCGCTTTTG CTTTCGGGGT TGTCATCTGG
GGCCGTTTGT GTGACGTGAT CGGCCGGCGC CCCACCATTT TGGCCGGTTT GGCGCTGTAT
CTGCTGGCGT CGATCATCGC CATCTTCAGC ACCGGCTTTA CCCTGCTGTT GGCGGCCAGG
GTGCTGGCGG CGTTTGGTGC AGCGGTGGGG TCCGTAGGCA CCCAGACTGC CATTCGCGAT
CGGTTCGACG GTTATGAGCT GGCGCGGGTG TTTTCCGTGA TGGGGATTGC GATGGCGGTC
AGCCCTGCGG TGGGGGTGCT GAGCGGCGCC CTGTTAACCC ATTACTGGGG TTATCAGGGG
GTGTTTGCCG GGTTGGCGGC GTTGGCCGCC TTGCTGCTGG CCTATGCCGC ATGGCAGTTG
CCGGAAACGC GCCCGGCGCA GGTGGTGAAA AGCTCCTTCT TCGGCACGTT TGGCAGAATG
GTGAAAGACG GCGATATCTG GCGCAGCGCA TGGCTGGTGG CCCTGTTCAA CGTCTGCATG
TTCAGCTATT ACCAACTGGC ACCGTTTCGG TTTGAAGCGC TGGGCCTTCC GCCGCAGTGG
TTTGGCTATA CCGGGTTGGT GCTGGCCGCC GGCGTCGGGA TCGGCGCGGC AATCAACAAG
TTTCTCATCG CCAAACAGTG GCTGTTTACG CCACTGCTGA TGCTGGCCTG CGTATTGGCG
TTGATCGGCG GCGGCCTGGT GTTCCTGTTG GAAGATAAGC TGTGGTTCGT GCTGCCGATG
ATGCTGGTGG TGATGGCCTA CGGCATCGCG ATCCCAAATA TTCTGGCGCG GGCGCTGCGA
AATTATAAGG ATTGCATGGG CACCGCGGGC GCAATCCTTG GCCTGATGTA CTACCTGATG
CTGGCGGCGG GGCTGGTGCT GGCCGGGTTG GCGCAGCGGC CGGGCATCGT ACTGATGACG
AGTAGCGCCT GCGCGCTGCT GCTGGCGTTG ACCGTGGTGC GCGGTGAACG CAATATCGCT
ATCTCAACCC AACCCGGCAA ACCGCTCCCG GATCGTCTCC TCCGGTAA
 
Protein sequence
MQRRLTLTLA TLMMMFPQIV ETIYSPALTH IADGFHVSAE VAAQTLSCYF FAFAFGVVIW 
GRLCDVIGRR PTILAGLALY LLASIIAIFS TGFTLLLAAR VLAAFGAAVG SVGTQTAIRD
RFDGYELARV FSVMGIAMAV SPAVGVLSGA LLTHYWGYQG VFAGLAALAA LLLAYAAWQL
PETRPAQVVK SSFFGTFGRM VKDGDIWRSA WLVALFNVCM FSYYQLAPFR FEALGLPPQW
FGYTGLVLAA GVGIGAAINK FLIAKQWLFT PLLMLACVLA LIGGGLVFLL EDKLWFVLPM
MLVVMAYGIA IPNILARALR NYKDCMGTAG AILGLMYYLM LAAGLVLAGL AQRPGIVLMT
SSACALLLAL TVVRGERNIA ISTQPGKPLP DRLLR