Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0534 |
Symbol | treR |
ID | 5606886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 587957 |
End bp | 588904 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640936043 |
Product | trehalose repressor |
Protein accession | YP_001476770 |
Protein GI | 157368781 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC GGCTGACCAT CAAGGACATC GCACGCCTGA GCGGCGTAGG TAAATCCACC GTATCACGCG TGTTGAACAA CGAAGGCAGC GTGAGCCCGC AGACCCGTGA ACGGGTGGAA GCGGTGATCC GTCAGCAGGG GTTCACCCCG TCCAAGTCTG CTCGCGCCAT GCGCGGCCAG AGCGACAAAG TGGTCGGCAT TATCGTTTCC CGTCTCGACT CTCCGTCTGA AAACCAGGCG GTACGCACCA TGTTGCCACT GCTGTATCAG CACGGCTTCG ACCCGATCGT GATGGAAAGC CAGTTCGAGA CCCGGCTGGT GGAAGAGCAT TTGCACGTTC TGCAACAGCG TAATGTCGAC GGAGTGATCC TGTTCGGTTT CACCGGCCTG ACGGCGGCCA TGCTCAGCCC ATGGCAGGAT AAAATGGTGG TGCTGGCACG CGAATACGAG GGGTTTTCTT CGGTTTGCTA CGACGACGAC GGTGCCGTGC GGCTGCTGAT GGAACGCCTG CAGCAACAGG GCCACCGGCA TATCGGCTAC CTGGGGGTGC AACTGTCGGA TGCCACCACC GGTATGCGCC GCCACCAGGC CTATCTCGAC GCCTGCCGGC AACAGCAGAT TACCCCAAGC GTGGCGCTGG GCGAACTGAG CTATCAGAGC GGCTTCCAAC TGGCTGCCTC GGTCATCGAT GCCCAGACTA CCGCCCTGGT GTGCGCCTCC GACACTATCG CCCTGGGTGC GATCAAATAC CTGCAACAGC AGCATATTGC CCCGCTGCAA GTGTGCGGCA TCGGCAACAC GCCGCTGCTA AACTTCCTGT TCCCCGAAAC CTTTTCGGTT GATCTGGGCT ACGGCACGGC CGGGCTGCAG GCCGCGCAAC AGCTGCTGGG CCAGCTCAGC GGCGAACAGG GCATCCGCCA GATCATCGTA CCCAGCCAAC TCGCCTAA
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Protein sequence | MQNRLTIKDI ARLSGVGKST VSRVLNNEGS VSPQTRERVE AVIRQQGFTP SKSARAMRGQ SDKVVGIIVS RLDSPSENQA VRTMLPLLYQ HGFDPIVMES QFETRLVEEH LHVLQQRNVD GVILFGFTGL TAAMLSPWQD KMVVLAREYE GFSSVCYDDD GAVRLLMERL QQQGHRHIGY LGVQLSDATT GMRRHQAYLD ACRQQQITPS VALGELSYQS GFQLAASVID AQTTALVCAS DTIALGAIKY LQQQHIAPLQ VCGIGNTPLL NFLFPETFSV DLGYGTAGLQ AAQQLLGQLS GEQGIRQIIV PSQLA
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