Gene Spro_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0419 
Symbol 
ID5602518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp464985 
End bp466781 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content59% 
IMG OID640935923 
Productfumarate reductase flavoprotein subunit 
Protein accessionYP_001476655 
Protein GI157368666 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01176] fumarate reductase, flavoprotein subunit
[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000541529 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAAACCT TTAACGCCGA TCTTGCCATT ATTGGGGCCG GGGGTGCTGG TTTACGTGCA 
GCAATAGCCG CAGCGGAAGC CAACCCCCAA CTGAAAATCG CGCTAATCTC AAAAGTCTAC
CCGATGCGCA GCCATACGGT GGCCGCTGAA GGAGGCTCCG CCGCCGTCAC TCAGGATCAC
GATAGCTTCG ACTACCACTT CAACGACACC GTTGCCGGTG GCGATTGGCT GTGTGAACAG
GACGTGGTCG ACCATTTCGT CCACAACTGC CCGCGCGAAA TGACCCAGCT TGAGCAATGG
GGTTGTCCAT GGAGCCGTAA AGAGGACGGT TCAGTCAACG TACGTCGCTT CGGCGGCATG
AAGATTGAGC GCACCTGGTT CGCCGCCGAC AAGACCGGCT TCCACATGCT GCACACCCTG
TTCCAGACCT CGCTCAAATA TCCGCAAATC CAGCGTTTCG ACGAGCACTT CGTGCTGGAT
ATTCTGGTGG ATGACGGCCA GGCCCGCGGC CTGGTGGCGA TGAACATGAT GGAAGGCACC
CGCGTGCAGA TCCGTGCCAA TGCAGTAGTC ATGGCTACCG GCGGTGCCGG CCGCGTGTAC
CGCTATAACA CCAACGGCGG TATCGTCACC GGTGATGGCA TGGGCATGGC GTTCCACCAC
GGCATACCGC TGCGTGATAT GGAGTTCGTC CAATATCACC CTACCGGCCT GCCGGGCTCC
GGTATCCTGA TGACCGAAGG TTGCCGTGGC GAAGGCGGCA TTCTGGTAAA CAAAGACGGC
TACCGCTACC TGCAGGACTA CGGCATGGGG CCGGAAACCC CGCTGGGTGA GCCAAAGAAC
AAATACATGG AACTGGGCCC GCGCGACAAG GTTTCGCAGG CTTTCTGGCA TGAATGGCGT
GCCGGCCGTA CCGTTGCTAC CCCGCGCGGA GACGTGGTTT ATCTCGACCT GCGCCACCTG
GGTGAAAAGA AACTGCTGGA ACGTCTGCCG TTCATCTGTG AACTGGCCAA GGCCTATGTC
GGCGTCGACC CGGTGAAAGA GCCGATCCCG GTACGTCCGA CCGCGCACTA CACCATGGGC
GGCATTGAAA CCGATCAAAA CTGCGAAACC CGTATCAAAG GGCTGTTTGC CGTCGGTGAA
TGTTCCTCCG TCGGCCTGCA CGGCGCCAAC CGCCTGGGTT CCAATTCGCT GGCGGAACTG
GTGGTGTTCG GCCGGGTAGC CGGTGAACAA GCCGCTCGCC GCGCGCTGGA AACCGGCCCG
GCGAACGGTA GTGCTCTGGA TGCACAGGGG CGCGACGTCG AAACCCGCTT GAGCAACCTG
ATGAAACAGG AAGGCAACGA GAACTGGGCC AAAATCCGCG ACGAGATGGG CATGTCGATG
GAAGAAGGCT GCGGTATTTA CCGCACGCCG GAACTGATGC AGAAAACCGT CGATAAACTG
GCCGAGCTGA AAGAACGCTT CAAGCGCGTC AAAATTACCG ACAGCTCCAG CGTGTTCAAT
ACCGATCTGC TGTACACCAT CGAGCTGGGT TACGGGCTGG ACGTGGCCGA ATGCATGGCG
CATTCCGCCT TCAACCGTAA AGAATCCCGC GGTGCCCACC AGCGTCTGGA CGAAGGCTGT
ACCGAACGTG ACGACGTGAA TTTCCTCAAG CATACGCTGG CGTTCCATAA CCCGAACGGC
GCACCACGCC TGGAATACAG CGACGTGAAG ATCACCAAAC TGCCACCGGC CAAACGTGTT
TACGGCGCTG AAGCCGAAGC GCAGGATAAA AAGGATAAGG AGCAGGCAAA TGGCTGA
 
Protein sequence
MQTFNADLAI IGAGGAGLRA AIAAAEANPQ LKIALISKVY PMRSHTVAAE GGSAAVTQDH 
DSFDYHFNDT VAGGDWLCEQ DVVDHFVHNC PREMTQLEQW GCPWSRKEDG SVNVRRFGGM
KIERTWFAAD KTGFHMLHTL FQTSLKYPQI QRFDEHFVLD ILVDDGQARG LVAMNMMEGT
RVQIRANAVV MATGGAGRVY RYNTNGGIVT GDGMGMAFHH GIPLRDMEFV QYHPTGLPGS
GILMTEGCRG EGGILVNKDG YRYLQDYGMG PETPLGEPKN KYMELGPRDK VSQAFWHEWR
AGRTVATPRG DVVYLDLRHL GEKKLLERLP FICELAKAYV GVDPVKEPIP VRPTAHYTMG
GIETDQNCET RIKGLFAVGE CSSVGLHGAN RLGSNSLAEL VVFGRVAGEQ AARRALETGP
ANGSALDAQG RDVETRLSNL MKQEGNENWA KIRDEMGMSM EEGCGIYRTP ELMQKTVDKL
AELKERFKRV KITDSSSVFN TDLLYTIELG YGLDVAECMA HSAFNRKESR GAHQRLDEGC
TERDDVNFLK HTLAFHNPNG APRLEYSDVK ITKLPPAKRV YGAEAEAQDK KDKEQANG