Gene Spro_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0105 
Symbol 
ID5605485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp112502 
End bp113356 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID640935590 
ProductLysR family transcriptional regulator 
Protein accessionYP_001476343 
Protein GI157368354 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTT ACCCGATGTT CAATCCGCAG TTACTGCTCA GCTTTGTCGC AGTATGCGAC 
AGCAACAGCT TCACTCGCGC CGCAGAGCGG GTATTTTTGT CGCAGTCGAC CGTCAGCCAA
CAGGTGCGCC GCTTGGAAGA AATGCTGGGT AAACCCCTGT TTGAACGTTC GTCCCATCAG
GTACTGCTGA CCGAGGAAGG CGTCAAGCTG TTGAGCTATG CGCGGCGCAT CATCGCGCTG
AATGAAGAGG CGCACGACGC CTTGACCGGC ATCTGGCGCG ACGGCGTACT ACGGTTGGGG
ATGCCGGAGG ATTTTGCCGC CCCCACCACC GAACTGCTGG CGGAGTTCAG CCGGGCGCAT
CCGCATCTGC GGCTGGACGT CACCAGCGGC CTGAGCGCCG ATCTGCACAG TGCCTACGCC
CGTGAAGAGC TGGATCTGAT CCTGGTTAAA CAGCGCCGTA GCCAGCCGCC GCGGGCCGCC
CGGCCGGAAC CGCTGCTGTG GCTGGACAGC TTGGCCTTCC CGGCAATAGA ACAGTCGCCG
GTACCGCTGG CGGTATTCCC GCTCAATGGG TTATATCGCG ATGATTTGTG TCAGGCGCTG
GATAACCTCG GCAAGCGCTG GCGTATTGGC TACAGCAGCG CCAGTCTGGC CGCACTCACC
GCCGCATCCG CCGCCGGGCT GGGCGTCACC CTGCTGCCGG CCGGCTGCCG CTTGCCCAGC
CATCGGGTTC TCGGCAGCGC CGAAGGGTTG CCGCCGATCG ACAACATTGA GCTGGCGCTG
TACTACCGCG ACGGCGCCCC CGCAGCCACT CCCGCGCTGG CCGAACGGCT GAAGGCGTTT
TGTGGGTTGG CGTGA
 
Protein sequence
MNRYPMFNPQ LLLSFVAVCD SNSFTRAAER VFLSQSTVSQ QVRRLEEMLG KPLFERSSHQ 
VLLTEEGVKL LSYARRIIAL NEEAHDALTG IWRDGVLRLG MPEDFAAPTT ELLAEFSRAH
PHLRLDVTSG LSADLHSAYA REELDLILVK QRRSQPPRAA RPEPLLWLDS LAFPAIEQSP
VPLAVFPLNG LYRDDLCQAL DNLGKRWRIG YSSASLAALT AASAAGLGVT LLPAGCRLPS
HRVLGSAEGL PPIDNIELAL YYRDGAPAAT PALAERLKAF CGLA