Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0105 |
Symbol | |
ID | 5605485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 112502 |
End bp | 113356 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640935590 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001476343 |
Protein GI | 157368354 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTT ACCCGATGTT CAATCCGCAG TTACTGCTCA GCTTTGTCGC AGTATGCGAC AGCAACAGCT TCACTCGCGC CGCAGAGCGG GTATTTTTGT CGCAGTCGAC CGTCAGCCAA CAGGTGCGCC GCTTGGAAGA AATGCTGGGT AAACCCCTGT TTGAACGTTC GTCCCATCAG GTACTGCTGA CCGAGGAAGG CGTCAAGCTG TTGAGCTATG CGCGGCGCAT CATCGCGCTG AATGAAGAGG CGCACGACGC CTTGACCGGC ATCTGGCGCG ACGGCGTACT ACGGTTGGGG ATGCCGGAGG ATTTTGCCGC CCCCACCACC GAACTGCTGG CGGAGTTCAG CCGGGCGCAT CCGCATCTGC GGCTGGACGT CACCAGCGGC CTGAGCGCCG ATCTGCACAG TGCCTACGCC CGTGAAGAGC TGGATCTGAT CCTGGTTAAA CAGCGCCGTA GCCAGCCGCC GCGGGCCGCC CGGCCGGAAC CGCTGCTGTG GCTGGACAGC TTGGCCTTCC CGGCAATAGA ACAGTCGCCG GTACCGCTGG CGGTATTCCC GCTCAATGGG TTATATCGCG ATGATTTGTG TCAGGCGCTG GATAACCTCG GCAAGCGCTG GCGTATTGGC TACAGCAGCG CCAGTCTGGC CGCACTCACC GCCGCATCCG CCGCCGGGCT GGGCGTCACC CTGCTGCCGG CCGGCTGCCG CTTGCCCAGC CATCGGGTTC TCGGCAGCGC CGAAGGGTTG CCGCCGATCG ACAACATTGA GCTGGCGCTG TACTACCGCG ACGGCGCCCC CGCAGCCACT CCCGCGCTGG CCGAACGGCT GAAGGCGTTT TGTGGGTTGG CGTGA
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Protein sequence | MNRYPMFNPQ LLLSFVAVCD SNSFTRAAER VFLSQSTVSQ QVRRLEEMLG KPLFERSSHQ VLLTEEGVKL LSYARRIIAL NEEAHDALTG IWRDGVLRLG MPEDFAAPTT ELLAEFSRAH PHLRLDVTSG LSADLHSAYA REELDLILVK QRRSQPPRAA RPEPLLWLDS LAFPAIEQSP VPLAVFPLNG LYRDDLCQAL DNLGKRWRIG YSSASLAALT AASAAGLGVT LLPAGCRLPS HRVLGSAEGL PPIDNIELAL YYRDGAPAAT PALAERLKAF CGLA
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